Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734275.1_202014-07-28]
8,190 sequences; 36,679,878 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq6 417 1e-114
>seq6
Length=686
Score = 417 bits (462), Expect = 1e-114
Identities = 289/316 (91%), Gaps = 10/316 (3%)
Strand=Plus/Plus
Query 5 TGGTCCGGCCGGGCCTTTCCTTCT-GGGGATCCGCATGCCCTTCACTGGGTGTGCCGGGG 63
||||||| |||| |||||| ||| ||||| ||||||||||||||||||| | | ||||
Sbjct 315 TGGTCCG--CGGGGCTTTCCCTCTTGGGGAACCGCATGCCCTTCACTGGGCG-GTGGGGG 371
Query 64 AGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACA 123
| ||||||||||| ||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct 372 A-CCAGGACTTTTCCTTTGAAAA-ATTAGAGTGTTCAAAGCAGGCCTATGCTCGAATACA 429
Query 124 TTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCG 183
|||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||
Sbjct 430 TTAGCATGGAATAATAGAATAGGACGTGTGGTTCTATTTTGTTGGTTTCTAGG-CCGCCG 488
Query 184 TAATGA-TTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTT 242
|||||| ||| |||||| ||||| ||| |||||||||||||||||||||||||||||||
Sbjct 489 TAATGATTTATTAGGGACAGTCGAGGGCATCAGTATTCAATTGTCAGAGGTGAAATTCTT 548
Query 243 GGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGT 302
||||||||||||||||||||||||||||||| || |||||||| ||||||||||||||
Sbjct 549 GGATTTATTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGAT-TTTTCATTAATCAG- 606
Query 303 GAACGAAAGTTAGGGG 318
||||||||||||||||
Sbjct 607 GAACGAAAGTTAGGGG 622
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 915125045120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |