Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734275.1_202014-07-28]
8,190 sequences; 36,679,878 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq33 304 5e-80
seq27 212 3e-52
seq34 109 2e-21
>seq33
Length=404
Score = 304 bits (336), Expect = 5e-80
Identities = 300/381 (79%), Gaps = 10/381 (3%)
Strand=Plus/Plus
Query 245 GGTGCACTCTTCTGCGGTCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGA 304
||||||||| | |||| |||||||||| | | ||| ||| |||||| |||||
Sbjct 34 GGTGCACTCCGCC-CGGTTCGGCCAGCATCGTTTTTGCCGGG-GGACAAAGGCTTCGGGA 91
Query 305 ATGTGGCCCCCTTCGGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAG 364
| ||||| || ||||||| ||||||||||||| | | ||| | |||| || | ||
Sbjct 92 ACGTGGCTCCTTTCGGGGAGTGTTATAGCCCGTTGCGTAATAC--CCCGGGGGGGCCGAC 149
Query 365 GTCCGCGCTCCGGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGG 424
| ||||||| |||| ||||||||||||||||||| | |||| ||||||| | |||||||
Sbjct 150 GACCGCGCTTCGGCAAGGATGCTGGCGTAATGGTCATCAGCGACCCGTCT-GAAACACGG 208
Query 425 ACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAG 484
||| ||||||| | ||| ||||||||||||||||| ||||||| |||||||||||||
Sbjct 209 ACCGAGGAGTCAAGCATTAGTGCGAGTGTTTGGGTGTAAAACCCGCACGCGTAATGAAAG 268
Query 485 TGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGG 544
|||||| ||||| || | || ||| ||||| || || |||||| |||||| ||
Sbjct 269 TGAACGTAGGTGAGA----GCTTCGGCGCATCATCGCCCATTCTTGATGTTTTCGGAAGG 324
Query 545 ATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGT 604
||||||||| |||||| | | ||||||||||||||||||||||| | ||||| |||
Sbjct 325 ATTTGAGTAGGAGCATTAACGCTTGGACCCGAAAGATGGTGAACTATACTTGAAT-GGGG 383
Query 605 GAAGCCAGAGGAAACTCTGGT 625
|||||||||||||||||||||
Sbjct 384 GAAGCCAGAGGAAACTCTGGT 404
>seq27
Length=483
Score = 212 bits (234), Expect = 3e-52
Identities = 133/141 (94%), Gaps = 2/141 (1%)
Strand=Plus/Plus
Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82
||| |||||||||||||||||| ||| |||||||||||| ||||||||||||||||||||
Sbjct 343 TGTAAAGCTCCTTCGACGAGTC-AGTAGTTTGGGAATGCTGCTCTAAATGGGAGGTAAAT 401
Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142
|||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct 402 TTCTTCTAAAGCTAAATACCGGCCAGAG-CCGATAGCGCACAAGTAGAGTGATCGAAAGA 460
Query 143 TGAAAAGCACTTTGGAAAGAG 163
|||||||||||||| ||||||
Sbjct 461 TGAAAAGCACTTTGAAAAGAG 481
>seq34
Length=722
Score = 109 bits (120), Expect = 2e-21
Identities = 63/65 (97%), Gaps = 0/65 (0%)
Strand=Plus/Minus
Query 619 CTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGG 678
||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||
Sbjct 722 CTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGAGTATAGG 663
Query 679 GGCGA 683
|||||
Sbjct 662 GGCGA 658
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079824324500
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |