Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734275.1_202014-07-28] 8,190 sequences; 36,679,878 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq33 304 5e-80 seq27 212 3e-52 seq34 109 2e-21 >seq33 Length=404 Score = 304 bits (336), Expect = 5e-80 Identities = 300/381 (79%), Gaps = 10/381 (3%) Strand=Plus/Plus Query 245 GGTGCACTCTTCTGCGGTCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGA 304 ||||||||| | |||| |||||||||| | | ||| ||| |||||| ||||| Sbjct 34 GGTGCACTCCGCC-CGGTTCGGCCAGCATCGTTTTTGCCGGG-GGACAAAGGCTTCGGGA 91 Query 305 ATGTGGCCCCCTTCGGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAG 364 | ||||| || ||||||| ||||||||||||| | | ||| | |||| || | || Sbjct 92 ACGTGGCTCCTTTCGGGGAGTGTTATAGCCCGTTGCGTAATAC--CCCGGGGGGGCCGAC 149 Query 365 GTCCGCGCTCCGGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGG 424 | ||||||| |||| ||||||||||||||||||| | |||| ||||||| | ||||||| Sbjct 150 GACCGCGCTTCGGCAAGGATGCTGGCGTAATGGTCATCAGCGACCCGTCT-GAAACACGG 208 Query 425 ACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAG 484 ||| ||||||| | ||| ||||||||||||||||| ||||||| ||||||||||||| Sbjct 209 ACCGAGGAGTCAAGCATTAGTGCGAGTGTTTGGGTGTAAAACCCGCACGCGTAATGAAAG 268 Query 485 TGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGG 544 |||||| ||||| || | || ||| ||||| || || |||||| |||||| || Sbjct 269 TGAACGTAGGTGAGA----GCTTCGGCGCATCATCGCCCATTCTTGATGTTTTCGGAAGG 324 Query 545 ATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGT 604 ||||||||| |||||| | | ||||||||||||||||||||||| | ||||| ||| Sbjct 325 ATTTGAGTAGGAGCATTAACGCTTGGACCCGAAAGATGGTGAACTATACTTGAAT-GGGG 383 Query 605 GAAGCCAGAGGAAACTCTGGT 625 ||||||||||||||||||||| Sbjct 384 GAAGCCAGAGGAAACTCTGGT 404 >seq27 Length=483 Score = 212 bits (234), Expect = 3e-52 Identities = 133/141 (94%), Gaps = 2/141 (1%) Strand=Plus/Plus Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82 ||| |||||||||||||||||| ||| |||||||||||| |||||||||||||||||||| Sbjct 343 TGTAAAGCTCCTTCGACGAGTC-AGTAGTTTGGGAATGCTGCTCTAAATGGGAGGTAAAT 401 Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142 |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||| Sbjct 402 TTCTTCTAAAGCTAAATACCGGCCAGAG-CCGATAGCGCACAAGTAGAGTGATCGAAAGA 460 Query 143 TGAAAAGCACTTTGGAAAGAG 163 |||||||||||||| |||||| Sbjct 461 TGAAAAGCACTTTGAAAAGAG 481 >seq34 Length=722 Score = 109 bits (120), Expect = 2e-21 Identities = 63/65 (97%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 619 CTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGG 678 ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| Sbjct 722 CTCTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGAGTATAGG 663 Query 679 GGCGA 683 ||||| Sbjct 662 GGCGA 658 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079824324500