Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734275.1_202014-07-28]
8,190 sequences; 36,679,878 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq7 374 2e-101
seq8 87.8 3e-15
seq1246 75.2 2e-11
>seq7
Length=468
Score = 374 bits (414), Expect = 2e-101
Identities = 237/253 (94%), Gaps = 4/253 (2%)
Strand=Plus/Minus
Query 76 TTAGAGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCC 135
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 468 TTAGAGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCC 409
Query 136 CTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTG 195
||||||||||||||||||||||||||||||||||||| ||||| ||||| | | |||||
Sbjct 408 CTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACACAGCCAGCGAGTCCTT--CCTTG 351
Query 196 GCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATT 255
||| ||||| | |||||||||||||||||| |||||||||||||||||||| ||||||||
Sbjct 350 GCC-GAAGGCCCGGGTAATCTTGTTAAACTGTGTCGTGCTGGGGATAGAGC-TTGCAATT 293
Query 256 ATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTC 315
|||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||
Sbjct 292 ATTGCTCTTCAACGAGGAATCCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGTC 233
Query 316 CCTGCCCTTTGTA 328
|||||||||||||
Sbjct 232 CCTGCCCTTTGTA 220
>seq8
Length=227
Score = 87.8 bits (96), Expect = 3e-15
Identities = 64/73 (88%), Gaps = 1/73 (1%)
Strand=Plus/Minus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79
|| |||||||||| |||||||||||||| | |||||||| || ||||||||||||||
Sbjct 72 GAACGAGACCTTA-CCTGCTAAATAGCCCGCGTCGCTTTGGGCGGGCGCCGGCTTCTTAG 14
Query 80 AGGGACTATCGGC 92
|||||||||||||
Sbjct 13 AGGGACTATCGGC 1
>seq1246
Length=15208
Score = 75.2 bits (82), Expect = 2e-11
Identities = 63/75 (84%), Gaps = 3/75 (4%)
Strand=Plus/Plus
Query 165 CACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAAC 224
|||||||| ||||| ||||| | || |||||||| ||| | |||||||||||||||||
Sbjct 6826 CACTGACACAGCCAGCGAGTCCTTC--CTTGGCCGAGAGGCCCGGGTAATCTTGTTAAAC 6883
Query 225 TCTGTCGTGCTGGGG 239
| ||||| |||||||
Sbjct 6884 TGTGTCG-GCTGGGG 6897
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947122424320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |