Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734275.1_202014-07-28]
8,190 sequences; 36,679,878 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq43 203 5e-50
>seq43
Length=854
Score = 203 bits (224), Expect = 5e-50
Identities = 223/281 (79%), Gaps = 12/281 (4%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| ||||||| |||| ||||||||||| |||| ||| ||||||
Sbjct 537 GTACGAGAGGAACCGCCTCATTCAGA-TAAT-GGTTTTTGCGGTTGTCCGACAGGGCAGT 480
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC-ATGCC 119
|||||||||||||||||||| |||| | ||| ||||||||||||||| |||||| ||||
Sbjct 479 GCCGCGAAGCTACCATCTGCAGGATAACGGC-GAACGCCTCTAAGTCGGAATCCTTTGCC 421
Query 120 AGAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAA 179
|||||| | ||| | |||| |||| | ||| |||||| ||||||||||||||| || |
Sbjct 420 AGAACGCGACGATAC-CTCCCGCACGT-TTAGACGGATAAGAATAGGCTTCGGCCTCGTA 363
Query 180 CCTTAGCAGGCCGGCAACGGGCGTCCCGC-GGAAGCGCGGGGCGCTCAGCTGGCGGATTG 238
|| |||||| || ||| || | || ||||||| || | | | | ||| ||||
Sbjct 362 TCTCAGCAGG-CGATAAC-CCCGCCGGGCTCGAAGCGC-CGGTGGTGA-TTCGCGTATTG 307
Query 239 CAA-TTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
|| ||| |||| |||| ||| ||||||||||||||||||
Sbjct 306 TAATTTTGACCACGCGCGGGGTCAAATCCTTTGCAGACGAC 266
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819135004160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |