Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734275.1_202014-07-28] 8,190 sequences; 36,679,878 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq43 203 5e-50 >seq43 Length=854 Score = 203 bits (224), Expect = 5e-50 Identities = 223/281 (79%), Gaps = 12/281 (4%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| ||||||| |||| ||||||||||| |||| ||| |||||| Sbjct 537 GTACGAGAGGAACCGCCTCATTCAGA-TAAT-GGTTTTTGCGGTTGTCCGACAGGGCAGT 480 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC-ATGCC 119 |||||||||||||||||||| |||| | ||| ||||||||||||||| |||||| |||| Sbjct 479 GCCGCGAAGCTACCATCTGCAGGATAACGGC-GAACGCCTCTAAGTCGGAATCCTTTGCC 421 Query 120 AGAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAA 179 |||||| | ||| | |||| |||| | ||| |||||| ||||||||||||||| || | Sbjct 420 AGAACGCGACGATAC-CTCCCGCACGT-TTAGACGGATAAGAATAGGCTTCGGCCTCGTA 363 Query 180 CCTTAGCAGGCCGGCAACGGGCGTCCCGC-GGAAGCGCGGGGCGCTCAGCTGGCGGATTG 238 || |||||| || ||| || | || ||||||| || | | | | ||| |||| Sbjct 362 TCTCAGCAGG-CGATAAC-CCCGCCGGGCTCGAAGCGC-CGGTGGTGA-TTCGCGTATTG 307 Query 239 CAA-TTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 || ||| |||| |||| ||| |||||||||||||||||| Sbjct 306 TAATTTTGACCACGCGCGGGGTCAAATCCTTTGCAGACGAC 266 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819135004160