Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734275.1_202014-07-28]
8,190 sequences; 36,679,878 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq13 497 3e-138
seq6 165 2e-38
>seq13
Length=513
Score = 497 bits (550), Expect = 3e-138
Identities = 330/360 (92%), Gaps = 5/360 (1%)
Strand=Plus/Plus
Query 147 CCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTG 206
|||||| | ||||||||||||| |||| || ||||| | || || ||||||||||
Sbjct 1 CCCTAACCCTCCGTTACCCGTTGTCACCACGGCTGGCCAAGACCCAGCCGTCGAAAGTTG 60
Query 207 ATAGGGCAGAAATTTGAATGAACCATCGCCGGCTCAAGGCCATGCGATTCGTTAA-GTTA 265
||||||||||||||||||||||| ||||||||| ||||||| ||||||||| || ||||
Sbjct 61 ATAGGGCAGAAATTTGAATGAAC-ATCGCCGGCGCAAGGCCGTGCGATTCGAGAAAGTTA 119
Query 266 TTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGTTTTTTATCTAATAAATACACCCCTT 325
| ||||||||||| |||||||||||||| ||||||||| ||||||||||||||||||||
Sbjct 120 TCATGAATCACCAGTGAGCCCCGAAGGGCATTGGTTTTTAATCTAATAAATACACCCCTT 179
Query 326 CCGAAGTCGGGGTTTTTAGCATGTATTAGCT-CTAGAATTACCACGGTTATCCATGTAGT 384
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 180 CCGAAGTCGGGGTTTTTAGCATGTATTAGCTTCTAGAATTACCACGGTTATCCATGTAGT 239
Query 385 AAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAG 444
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 240 AAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCGCTGTATA- 298
Query 445 ATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||
Sbjct 299 ATTGCTTATACTTAGACATGCATGGCTTAATCTTTAAGACAAGCATATGAC-ACTGGCAG 357
>seq6
Length=686
Score = 165 bits (182), Expect = 2e-38
Identities = 136/162 (84%), Gaps = 4/162 (2%)
Strand=Plus/Minus
Query 1 GTACTCATTCCAATTACAAG-ACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59
||||||||||||||||| || ||||||||||||||||||||||||||| | | |||| ||
Sbjct 159 GTACTCATTCCAATTACCAGGACCCAAAAGAGCCCTGTATCAGTATTTCTCG-CACTCCC 101
Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119
|| || ||| |||||||||||||||||||||||||||||||||||||| |||||
Sbjct 100 CGCC--TGGCGGCATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTAAACGCCGT 43
Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTT 161
||||||||| ||||||| |||| |||||| | |||||
Sbjct 42 TTCTCAGGCGTTTTCTCCGGGGTCGAGCCCTAACCCTCCGTT 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1510276298240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |