Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734315.1_202014-07-28] 6,575 sequences; 37,493,836 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq3938 132 3e-29 seq61 104 1e-20 >seq3938 Length=28167 Score = 132 bits (146), Expect = 3e-29 Identities = 104/119 (87%), Gaps = 4/119 (3%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGA-TTTC-TCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGC 58 ||||||| | |||| | |||| | |||||||||||| || ||||||| |||||| || Sbjct 27944 GAACCCAGAAACTTGTACTTTCGTTGTAAGGTGCCGAACGGGTCAAAAA-ATAACACCGT 28002 Query 59 CCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| Sbjct 28003 CCGATCCCTAGTCGGCATAGTT-ATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 28060 >seq61 Length=515 Score = 104 bits (114), Expect = 1e-20 Identities = 65/69 (94%), Gaps = 1/69 (1%) Strand=Plus/Minus Query 49 ATAACATCGCCCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGAT 108 |||||| || |||||||||||||||||||||| | ||||||||||||||||||||||||| Sbjct 514 ATAACACCGTCCGATCCCTAGTCGGCATAGTT-ATGGTTAAGACTACGACGGTATCTGAT 456 Query 109 CGTCTTCGA 117 ||||||||| Sbjct 455 CGTCTTCGA 447 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278382839250