Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734315.1_202014-07-28]
6,575 sequences; 37,493,836 total letters
Query= AAMG01000190.1
Length=117
Score E
Sequences producing significant alignments: (Bits) Value
seq3938 132 3e-29
seq61 104 1e-20
>seq3938
Length=28167
Score = 132 bits (146), Expect = 3e-29
Identities = 104/119 (87%), Gaps = 4/119 (3%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGA-TTTC-TCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGC 58
||||||| | |||| | |||| | |||||||||||| || ||||||| |||||| ||
Sbjct 27944 GAACCCAGAAACTTGTACTTTCGTTGTAAGGTGCCGAACGGGTCAAAAA-ATAACACCGT 28002
Query 59 CCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
|||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||
Sbjct 28003 CCGATCCCTAGTCGGCATAGTT-ATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 28060
>seq61
Length=515
Score = 104 bits (114), Expect = 1e-20
Identities = 65/69 (94%), Gaps = 1/69 (1%)
Strand=Plus/Minus
Query 49 ATAACATCGCCCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGAT 108
|||||| || |||||||||||||||||||||| | |||||||||||||||||||||||||
Sbjct 514 ATAACACCGTCCGATCCCTAGTCGGCATAGTT-ATGGTTAAGACTACGACGGTATCTGAT 456
Query 109 CGTCTTCGA 117
|||||||||
Sbjct 455 CGTCTTCGA 447
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 278382839250
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |