Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734315.1_202014-07-28]
6,575 sequences; 37,493,836 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq6 446 3e-123
seq1798 84.2 4e-14
>seq6
Length=954
Score = 446 bits (494), Expect = 3e-123
Identities = 285/309 (92%), Gaps = 2/309 (1%)
Strand=Plus/Plus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79
|| ||||||||||||||||||||||||| | ||||||||||| ||||||||||||||
Sbjct 210 GAACGAGACCTTAACCTGCTAAATAGCCCGCGTCGCTTTGGCGGCGCGCCGGCTTCTTAG 269
Query 80 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 139
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 270 AGGGACTACCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 329
Query 140 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCG 199
||||||||||||||||||||||||||||||||| ||||| ||||| | | |||||||||
Sbjct 330 GATGTTCTGGGCCGCACGCGCGCTACACTGACACAGCCAGCGAGTCCTT--CCTTGGCCG 387
Query 200 GAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 259
||| | |||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 388 AGAGGCCCGGGTAATCTTGTTAAACTGTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 447
Query 260 CTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTG 319
|||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||
Sbjct 448 CTCTTCAACGAGGAATCCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGTCCCTG 507
Query 320 CCCTTTGTA 328
|||||||||
Sbjct 508 CCCTTTGTA 516
>seq1798
Length=15212
Score = 84.2 bits (92), Expect = 4e-14
Identities = 64/75 (85%), Gaps = 2/75 (3%)
Strand=Plus/Plus
Query 165 CACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAAC 224
|||||||| ||||| ||||| | || |||||||| ||| | |||||||||||||||||
Sbjct 6815 CACTGACACAGCCAGCGAGTCCTTC--CTTGGCCGAGAGGCCCGGGTAATCTTGTTAAAC 6872
Query 225 TCTGTCGTGCTGGGG 239
| |||||||||||||
Sbjct 6873 TGTGTCGTGCTGGGG 6887
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947137721600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |