Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734315.1_202014-07-28]
6,575 sequences; 37,493,836 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq13 214 3e-53
>seq13
Length=1854
Score = 214 bits (236), Expect = 3e-53
Identities = 219/278 (79%), Gaps = 6/278 (2%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| | |||||| |||||||||||||||| |||| ||| ||||||
Sbjct 1192 GTACGAGAGGAACCGCTCA-TTCAGA-TAATTGGTTTTTGCGGTTGTCCGACAGGGCAGT 1249
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
|||||||||||||||||||| |||| | ||||||||||||||||||| |||||| |||||
Sbjct 1250 GCCGCGAAGCTACCATCTGCAGGATAACGGCTGAACGCCTCTAAGTCGGAATCCTTGCCA 1309
Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAAC 180
||||| | ||| | |||| |||| ||| |||||| ||||||||||||||| || |
Sbjct 1310 GAACGCGACGATAC-CTCCCGCACGGTTTAGACGGATAAGAATAGGCTTCGGCCTCGTAT 1368
Query 181 CTTAGCAGGCCGGCAACGGGCGTCCCGCGGAAGCGCGGGGCGCTCAGCTGGCGGATTGCA 240
|| |||||| || ||| || | || | ||| || | | | | ||| |||| |
Sbjct 1369 CTCAGCAGG-CGATAAC-CCCGCCGGGCTCGAACGCCCGGTGGTGA-TTCGCGTATTGTA 1425
Query 241 ATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
|||| || |||| ||| ||||||||||||||||||
Sbjct 1426 ATTTTGACACGCGCGGGGTCAAATCCTTTGCAGACGAC 1463
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819147820800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |