Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734325.1_202014-07-28]
8,541 sequences; 36,263,528 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq20 392 6e-107
>seq20
Length=331
Score = 392 bits (434), Expect = 6e-107
Identities = 246/260 (95%), Gaps = 4/260 (2%)
Strand=Plus/Plus
Query 60 GGGGAGCCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAA 119
||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 2 GGGGAACCAGGACTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTATGCTCGAA 61
Query 120 TACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTT-GGTTTCTAGGAC 178
|||||||||||||||||||||||||||||| | |||||||||||||| ||||||||||||
Sbjct 62 TACATTAGCATGGAATAATAGAATAGGACG-GTGGTTCTATTTTGTTGGGTTTCTAGGAC 120
Query 179 CGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAAT 238
|| |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||
Sbjct 121 CG-CGTAATGATTAATAGGGACAGTCGGGGGCATCAGTATTCAATTGTCAGAGGTGAAAT 179
Query 239 TCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAAT 298
||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct 180 TCTTGGATTTATTGAAGACTAACTACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAAT 239
Query 299 CAGTGAACGAAAGTTAGGGG 318
||| ||||||||||| ||||
Sbjct 240 CAG-GAACGAAAGTTGGGGG 258
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 915121832768
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |