Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734325.1_202014-07-28]
8,541 sequences; 36,263,528 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq6 601 1e-169
>seq6
Length=1270
Score = 601 bits (666), Expect = 1e-169
Identities = 531/641 (83%), Gaps = 24/641 (4%)
Strand=Plus/Plus
Query 47 GTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCC 106
|| |||||||||||| |||||||||||||||||||||||||||||||||||||| ||||
Sbjct 1 GTAGTTTGGGAATGCTGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATACCGGCC 60
Query 107 AGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGAT-GAAAAGCACTTTGGAAAGAGAG 165
||||||||||||||||||||||| || | |||||||| |||| |||||||| |||||| |
Sbjct 61 AGAGACCGATAGCGCACAAGTAG-GT-AACGAAAGATGGAAAGGCACTTTGAAAAGAGGG 118
Query 166 TTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTG-CAACCAGACTTGCCCGCAGTT 224
|||||||| ||||||||||||||||||||||||||||| ||||||||||| || |
Sbjct 119 TTAAAAAGTACGTGAAATTGTTGAAAGGGAAGCGCTTGTGAACCAGACTTGGGCG-GGCG 177
Query 225 GCTCAACCGGC-CCCTCGGCCGGTGCACTCTTCTGCGGTCAGGCCAGCATCAGCTCGGGC 283
| ||| || || ||| || ||||||||| | |||| ||||||||||| | | ||
Sbjct 178 GATCATCCAGCGTTCTC-GCTGGTGCACTC--CCCCGGTTAGGCCAGCATC-GTTTTTGC 233
Query 284 GGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGTTATAGCCCGGGGTGGA 343
| ||| |||||| |||||| | ||| || ||||||| ||||||||||||| | | |
Sbjct 234 CGGGGGACAAAGGCTTCGGGAACG-GGCTCCTTTCGGGGAGTGTTATAGCCCGTTGCGTA 292
Query 344 ATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGCTAGGATGCTGGCGTAATGGTTGTAA 403
|| | || || |||| ||| || |||| |||| ||||||||||||||||||| | |
Sbjct 293 ATAC-CCCGGCGGGGACCGAG--CCCCGCTTCGGCAAGGATGCTGGCGTAATGGTCATCA 349
Query 404 GCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCA 463
||| ||||||||| |||||||||| ||||||| | ||| ||||||||||||||||| |
Sbjct 350 GCGACCCGTCTTGAAACACGGACCGAGGAGTCAAGCATTAGTGCGAGTGTTTGGGTGTAA 409
Query 464 AACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACC 523
|||||| || |||||||||||||||| ||||| || | || ||| ||||||||
Sbjct 410 AACCCGCACG-GTAATGAAAGTGAACGTAGGTGAGA----GCTTCGGCGCATCATCGACC 464
Query 524 GATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCA-TAGCTGTTGGGACCCGAAAGATG 582
||||||||||| |||||| ||||||||||| ||||| || | |||| ||| |||||||
Sbjct 465 GATCCTGATGTTTTCGGAAGGATTTGAGTAGGAGCATTAACGCTTGG--CCCCAAAGATG 522
Query 583 GTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTT 642
||||||||| | |||||||||||||||||||||||||||||||||| || ||||||||||
Sbjct 523 GTGAACTATACTTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGA-GCCCGCAGCGGTT 581
Query 643 CTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
||| |||||||||| | ||||||||||| ||||||||||||
Sbjct 582 CTGACGTGCAAATC-AACGTCAAATTTGAGTATAGGGGCGA 621
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079816795550
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |