Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734335.1_202014-07-28]
6,061 sequences; 37,013,264 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq29 266 6e-69
seq1 102 2e-19
seq4041 82.4 1e-13
>seq29
Length=1110
Score = 266 bits (294), Expect = 6e-69
Identities = 173/189 (92%), Gaps = 2/189 (1%)
Strand=Plus/Minus
Query 140 GATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCG 199
||||||||||||||||||||||||||||||||| ||||| ||||| | || ||||||||
Sbjct 1110 GATGTTCTGGGCCGCACGCGCGCTACACTGACACAGCCAGCGAGTCCTTC--CTTGGCCG 1053
Query 200 GAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 259
||| | |||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1052 AGAGGCCCGGGTAATCTTGTTAAACTGTGTCGTGCTGGGGATAGAGCATTGCAATTATTG 993
Query 260 CTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTG 319
|||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||
Sbjct 992 CTCTTCAACGAGGAATCCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGTCCCTG 933
Query 320 CCCTTTGTA 328
|||||||||
Sbjct 932 CCCTTTGTA 924
>seq1
Length=854
Score = 102 bits (112), Expect = 2e-19
Identities = 67/74 (91%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79
|| ||||||||||||||||||||||||| | ||||||||||| ||||||||||||||
Sbjct 74 GAACGAGACCTTAACCTGCTAAATAGCCCGCGTCGCTTTGGCGGCGCGCCGGCTTCTTAG 15
Query 80 AGGGACTATCGGCT 93
||||||||||||||
Sbjct 14 AGGGACTATCGGCT 1
>seq4041
Length=15223
Score = 82.4 bits (90), Expect = 1e-13
Identities = 63/74 (85%), Gaps = 2/74 (3%)
Strand=Plus/Plus
Query 165 CACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAAC 224
|||||||| ||||| ||||| | || |||||||| ||| | |||||||||||||||||
Sbjct 6826 CACTGACACAGCCAGCGAGTCCTTC--CTTGGCCGAGAGGCCCGGGTAATCTTGTTAAAC 6883
Query 225 TCTGTCGTGCTGGG 238
| ||||||||||||
Sbjct 6884 TGTGTCGTGCTGGG 6897
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947142590208
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |