Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734335.1_202014-07-28]
6,061 sequences; 37,013,264 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq44 728 0.0
>seq44
Length=1856
Score = 728 bits (806), Expect = 0.0
Identities = 486/537 (91%), Gaps = 7/537 (1%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
|||||| ||||| |||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 869 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGCCCCCCTTAGGACACCTGCGTTATG 810
Query 67 GTTTAACAGATGTGCCGCCCCA-GCCAAACTCCCCACCTGACAATGTCATCAACCCGGAT 125
|||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||| |
Sbjct 809 GTTTAACAGATGTGCCGCCCCAAGCCAAACTCCCCACCTGACAATGTCTTCAACCCGGGT 750
Query 126 CGGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTG 185
| ||||||||||||| |||| |||||| ||| || || |||| |||||| || |
Sbjct 749 CCGCCCGCGAAGGACGTTAAAACCAGAAGTTGGACGT--AAATCCAGCCCCGCTTAATCG 692
Query 186 ATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTT 245
| ||||||||||||| ||| | ||||||||||||||| |||||||| |||||||| |
Sbjct 691 AATAAGTAAAAAAACAATAGGAGTAGTGGTATTTCACCGGCGCCGAA---GCTCCCACCT 635
Query 246 ATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTT 305
|||||||||||| | ||| |||||||| ||| ||||||||||||||||||||||||||
Sbjct 634 ATTCTACACCTCCTATGTCTTTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTCTT 575
Query 306 CTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGAT 365
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 574 CTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGAC 515
Query 366 AGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCAT 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 514 AGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCAT 455
Query 426 TTGGCTA-CCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTT 484
||||||| ||| ||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 454 TTGGCTACCCTAAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTCAAATTA 395
Query 485 CTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTC 541
||| || ||||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct 394 CTTTGCTGTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACACCGCTTTC 338
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1635100890528
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |