Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734335.1_202014-07-28] 6,061 sequences; 37,013,264 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq44 210 4e-52 >seq44 Length=1856 Score = 210 bits (232), Expect = 4e-52 Identities = 223/281 (79%), Gaps = 10/281 (4%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGG-TTTTTGCGGCTGTCTGACCAGGCAG 59 |||||||||||||||| | |||||| ||||||| ||||||||| |||| ||| ||||| Sbjct 1192 GTACGAGAGGAACCGCTCA-TTCAGA-TAATTGGGTTTTTGCGGTTGTCCGACAGGGCAG 1249 Query 60 TGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTC-AGAATCCATGC 118 ||||||||||||||||||||| |||| | ||||||||||||||||||| |||||| ||| Sbjct 1250 TGCCGCGAAGCTACCATCTGCAGGATAACGGCTGAACGCCTCTAAGTCGGGAATCCTTGC 1309 Query 119 CAGAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGA 178 ||||||| | ||| | |||| |||| | ||| |||||| ||||||||||||||| || Sbjct 1310 CAGAACGCGACGATAC-CTCCCGCACGT-TTAGACGGATAAGAATAGGCTTCGGCCTCGT 1367 Query 179 ACCTTAGCAGGCCGGCAACGGGCGTCCCGC-GGAAGCGCGGGGCGCTCAGCTGGCGGATT 237 | || |||||| || ||| || | || ||||||| || | | | | ||| ||| Sbjct 1368 ATCTCAGCAGG-CGATAAC-CCCGCCGGGCTCGAAGCGCCCGGTGGTGA-TTCGCGTATT 1424 Query 238 GCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278 | ||||| || |||| ||| |||||||||||||||||| Sbjct 1425 GTAATTTTGACACGCGCGGGGTCAAATCCTTTGCAGACGAC 1465 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819151899904