Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734335.1_202014-07-28]
6,061 sequences; 37,013,264 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq44 210 4e-52
>seq44
Length=1856
Score = 210 bits (232), Expect = 4e-52
Identities = 223/281 (79%), Gaps = 10/281 (4%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGG-TTTTTGCGGCTGTCTGACCAGGCAG 59
|||||||||||||||| | |||||| ||||||| ||||||||| |||| ||| |||||
Sbjct 1192 GTACGAGAGGAACCGCTCA-TTCAGA-TAATTGGGTTTTTGCGGTTGTCCGACAGGGCAG 1249
Query 60 TGCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTC-AGAATCCATGC 118
||||||||||||||||||||| |||| | ||||||||||||||||||| |||||| |||
Sbjct 1250 TGCCGCGAAGCTACCATCTGCAGGATAACGGCTGAACGCCTCTAAGTCGGGAATCCTTGC 1309
Query 119 CAGAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGA 178
||||||| | ||| | |||| |||| | ||| |||||| ||||||||||||||| ||
Sbjct 1310 CAGAACGCGACGATAC-CTCCCGCACGT-TTAGACGGATAAGAATAGGCTTCGGCCTCGT 1367
Query 179 ACCTTAGCAGGCCGGCAACGGGCGTCCCGC-GGAAGCGCGGGGCGCTCAGCTGGCGGATT 237
| || |||||| || ||| || | || ||||||| || | | | | ||| |||
Sbjct 1368 ATCTCAGCAGG-CGATAAC-CCCGCCGGGCTCGAAGCGCCCGGTGGTGA-TTCGCGTATT 1424
Query 238 GCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
| ||||| || |||| ||| ||||||||||||||||||
Sbjct 1425 GTAATTTTGACACGCGCGGGGTCAAATCCTTTGCAGACGAC 1465
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819151899904
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |