Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734335.1_202014-07-28] 6,061 sequences; 37,013,264 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq2 693 0.0 seq2524 650 0.0 seq1109 77.0 1e-11 >seq2 Length=547 Score = 693 bits (768), Expect = 0.0 Identities = 449/491 (91%), Gaps = 1/491 (0%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 ||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||| Sbjct 490 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTCTCGTCACTACCT 431 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 | ||||||||| |||||||||||||||||||||||||||||||||||||| |||||| Sbjct 430 CGCCGTGTCGGCATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTAAACGCCGTT 371 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 |||||||| ||||||| |||| |||||| | ||||||||||||| |||| || Sbjct 370 TCTCAGGCGTTTTCTCCGGGGTCGAGCCCTAACCCTCCGTTACCCGTTGTCACCACGGCT 311 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 ||||| | || || |||| |||||||||||||||||||||||||||||||||||||| Sbjct 310 GGCCAAGACCCAGCCGTCGACAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCG 251 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300 ||||||| ||||||||| ||||||| ||||||||||| |||||||||||||| ||||| Sbjct 250 CAAGGCCGTGCGATTCGAGAAGTTATCATGAATCACCAGTGAGCCCCGAAGGGCATTGGT 191 Query 301 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 360 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 190 TTTTAATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 131 Query 361 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 130 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 71 Query 421 GCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 480 ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||| Sbjct 70 GCCATTCGCAGTTTCGCTGTATA-ATTGCTTATACTTAGACATGCATGGCTTAATCTTTA 12 Query 481 AGACAAGCATA 491 ||||||||||| Sbjct 11 AGACAAGCATA 1 >seq2524 Length=549 Score = 650 bits (720), Expect = 0.0 Identities = 440/492 (89%), Gaps = 1/492 (0%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 ||||||||||||||||| |||| | ||||||||| |||| |||||||||||||||||| Sbjct 492 GTACTCATTCCAATTACCAGACTCGAAAGAGCCCGGTATTGTTATTTATTGTCACTACCT 433 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 ||||||||| |||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 432 CCCCGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTAAACGCCGTT 373 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 |||||||| ||||||| |||| |||||| | ||||||||||||| |||| || Sbjct 372 TCTCAGGCGTTTTCTCCGGGGTCGAGCCCTAACCCTCCGTTACCCGTTGTCACCACGGCT 313 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 ||||| | || || |||| |||||||||||||||||||||||||||||||||||||| Sbjct 312 GGCCAAGACCCAGCCGTCGACAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCG 253 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300 ||||||| ||||||||| ||||||| ||||||||||| |||||||||||||| ||||| Sbjct 252 CAAGGCCGTGCGATTCGAGAAGTTATCATGAATCACCAGTGAGCCCCGAAGGGCATTGGT 193 Query 301 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 360 |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 192 TTTTAATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 133 Query 361 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 420 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 132 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACTATAACTGATTTAATGA 73 Query 421 GCCATTCGCAGTTTCACTGTATAGATT-GCTTATACTTAGACATGCATGGCTTAATCTTT 479 ||||||||||||||||| || | ||| | | ||||||| |||||||||||||||||||| Sbjct 72 GCCATTCGCAGTTTCACAGTCTGAATTCGTTCATACTTACACATGCATGGCTTAATCTTT 13 Query 480 GAGACAAGCATA 491 |||||||||||| Sbjct 12 GAGACAAGCATA 1 >seq1109 Length=298 Score = 77.0 bits (84), Expect = 1e-11 Identities = 44/45 (98%), Gaps = 0/45 (0%) Strand=Plus/Minus Query 460 ACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||| |||||||||||||||||||||||| Sbjct 298 ACATGCATGGCTTAATCTTTAAGACAAGCATATGACTACTGGCAG 254 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510308454656