Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734335.1_202014-07-28]
6,061 sequences; 37,013,264 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq2 693 0.0
seq2524 650 0.0
seq1109 77.0 1e-11
>seq2
Length=547
Score = 693 bits (768), Expect = 0.0
Identities = 449/491 (91%), Gaps = 1/491 (0%)
Strand=Plus/Minus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||
Sbjct 490 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTCTCGTCACTACCT 431
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
| ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 430 CGCCGTGTCGGCATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTAAACGCCGTT 371
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
|||||||| ||||||| |||| |||||| | ||||||||||||| |||| ||
Sbjct 370 TCTCAGGCGTTTTCTCCGGGGTCGAGCCCTAACCCTCCGTTACCCGTTGTCACCACGGCT 311
Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240
||||| | || || |||| ||||||||||||||||||||||||||||||||||||||
Sbjct 310 GGCCAAGACCCAGCCGTCGACAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCG 251
Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300
||||||| ||||||||| ||||||| ||||||||||| |||||||||||||| |||||
Sbjct 250 CAAGGCCGTGCGATTCGAGAAGTTATCATGAATCACCAGTGAGCCCCGAAGGGCATTGGT 191
Query 301 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 360
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 190 TTTTAATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 131
Query 361 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 130 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 71
Query 421 GCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 480
||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||
Sbjct 70 GCCATTCGCAGTTTCGCTGTATA-ATTGCTTATACTTAGACATGCATGGCTTAATCTTTA 12
Query 481 AGACAAGCATA 491
|||||||||||
Sbjct 11 AGACAAGCATA 1
>seq2524
Length=549
Score = 650 bits (720), Expect = 0.0
Identities = 440/492 (89%), Gaps = 1/492 (0%)
Strand=Plus/Minus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
||||||||||||||||| |||| | ||||||||| |||| ||||||||||||||||||
Sbjct 492 GTACTCATTCCAATTACCAGACTCGAAAGAGCCCGGTATTGTTATTTATTGTCACTACCT 433
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 432 CCCCGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTAAACGCCGTT 373
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180
|||||||| ||||||| |||| |||||| | ||||||||||||| |||| ||
Sbjct 372 TCTCAGGCGTTTTCTCCGGGGTCGAGCCCTAACCCTCCGTTACCCGTTGTCACCACGGCT 313
Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240
||||| | || || |||| ||||||||||||||||||||||||||||||||||||||
Sbjct 312 GGCCAAGACCCAGCCGTCGACAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCG 253
Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300
||||||| ||||||||| ||||||| ||||||||||| |||||||||||||| |||||
Sbjct 252 CAAGGCCGTGCGATTCGAGAAGTTATCATGAATCACCAGTGAGCCCCGAAGGGCATTGGT 193
Query 301 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 360
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 192 TTTTAATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 133
Query 361 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 420
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 132 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACTATAACTGATTTAATGA 73
Query 421 GCCATTCGCAGTTTCACTGTATAGATT-GCTTATACTTAGACATGCATGGCTTAATCTTT 479
||||||||||||||||| || | ||| | | ||||||| ||||||||||||||||||||
Sbjct 72 GCCATTCGCAGTTTCACAGTCTGAATTCGTTCATACTTACACATGCATGGCTTAATCTTT 13
Query 480 GAGACAAGCATA 491
||||||||||||
Sbjct 12 GAGACAAGCATA 1
>seq1109
Length=298
Score = 77.0 bits (84), Expect = 1e-11
Identities = 44/45 (98%), Gaps = 0/45 (0%)
Strand=Plus/Minus
Query 460 ACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
|||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 298 ACATGCATGGCTTAATCTTTAAGACAAGCATATGACTACTGGCAG 254
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1510308454656
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |