Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734345.1_202014-07-28] 7,027 sequences; 36,982,960 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq3180 250 4e-64 >seq3180 Length=500 Score = 250 bits (276), Expect = 4e-64 Identities = 197/229 (86%), Gaps = 8/229 (3%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||| |||| ||||| |||||||||||| ||| | Sbjct 235 GTACAAAGGGCAGGGACGTAATCAACGCAAGCTG--TGACTTGCGCTTACTAGGGATT-C 291 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 ||||||||||| ||| |||||||||| |||||||||| ||||| | ||| | |||||| Sbjct 292 CTCGTTGAAGAGCAATAATTGCAATGCTCTATCCCCAGCACGACACAGTTTAACAAGATT 351 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||||| ||| ||||||||| || |||||| || | ||||||||||||||||||| Sbjct 352 ACCCGGGCCTCTCGGCCAAG--GAAGGACTCGCTGGCTGTGTCAGTGTAGCGCGCGTGCG 409 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCC 228 |||||||||||| |||||||| ||||||||||||||||||||||||||| Sbjct 410 GCCCAGAACATC-AAGGGCAT-ACAGACCTGTTATTGCCTCAAACTTCC 456 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751948808305