Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734345.1_202014-07-28]
7,027 sequences; 36,982,960 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq51 293 1e-76
seq23 277 7e-72
seq24 185 4e-44
>seq51
Length=886
Score = 293 bits (324), Expect = 1e-76
Identities = 182/194 (94%), Gaps = 1/194 (1%)
Strand=Plus/Plus
Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82
||| ||||||||||||||||||| | |||||||||||| ||||||||||||||||||||
Sbjct 661 TGTAAAGCTCCTTCGACGAGTCGGGA-GTTTGGGAATGCTGCTCTAAATGGGAGGTAAAT 719
Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 720 TTCTTCTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 779
Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202
|||||||||||||| |||||| ||||||||| ||||||||||||||||||||||||||||
Sbjct 780 TGAAAAGCACTTTGAAAAGAGGGTTAAAAAGTACGTGAAATTGTTGAAAGGGAAGCGCTT 839
Query 203 GCAACCAGACTTGC 216
| |||||||||||
Sbjct 840 GTGACCAGACTTGC 853
>seq23
Length=344
Score = 277 bits (306), Expect = 7e-72
Identities = 270/340 (79%), Gaps = 11/340 (3%)
Strand=Plus/Plus
Query 262 TCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGG 321
||||||||||||| | | | ||| | |||||| |||||| ||||| || || |||
Sbjct 15 TCAGGCCAGCATCGGTTTCGCCGGGGGACAAAAGGCTTCGGGAACGTGGCTCCTTT-GGG 73
Query 322 GGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGCTAG 381
| ||||||||||||| | | ||| | || || |||| || | ||||||| |||| ||
Sbjct 74 GAGTGTTATAGCCCGTTGCGTAATACC-CCGGCGGGGACCGACGACCGCGCTTCGGCAAG 132
Query 382 GATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACAT 441
||||||||||||||||| | |||| ||||||||| ||| |||||| ||||||| | |||
Sbjct 133 GATGCTGGCGTAATGGTCATCAGCGACCCGTCTTG-AACCCGGACCGAGGAGTCAAGCAT 191
Query 442 CTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAAC 501
||||||||||||||||| ||||||| ||||||||||||||||||| ||||| || |
Sbjct 192 TAGTGCGAGTGTTTGGGTGTAAAACCCGC-CGCGTAATGAAAGTGAACGTAGGTGAGAGC 250
Query 502 CCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCA-T 560
|| ||| ||||||||||||||||||| |||||| ||||||||||| ||||| |
Sbjct 251 TTC----GGCGCATCATCGACCGATCCTGATGTTTTCGGAAGGATTTGAGTAGGAGCATT 306
Query 561 AGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATA 600
| | |||| |||||||||||||||||||| | ||||||
Sbjct 307 AACGCTTGG--CCCGAAAGATGGTGAACTATACTTGAATA 344
>seq24
Length=535
Score = 185 bits (204), Expect = 4e-44
Identities = 108/112 (96%), Gaps = 0/112 (0%)
Strand=Plus/Minus
Query 572 CCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGC 631
|||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||
Sbjct 535 CCCGAAAGATGGTGAACTATACTTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGC 476
Query 632 TCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
|||||||||||||| |||||||||||||||||||||||| ||||||||||||
Sbjct 475 TCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGAGTATAGGGGCGA 424
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079849270850
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |