Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734345.1_202014-07-28] 7,027 sequences; 36,982,960 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq51 293 1e-76 seq23 277 7e-72 seq24 185 4e-44 >seq51 Length=886 Score = 293 bits (324), Expect = 1e-76 Identities = 182/194 (94%), Gaps = 1/194 (1%) Strand=Plus/Plus Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82 ||| ||||||||||||||||||| | |||||||||||| |||||||||||||||||||| Sbjct 661 TGTAAAGCTCCTTCGACGAGTCGGGA-GTTTGGGAATGCTGCTCTAAATGGGAGGTAAAT 719 Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142 |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 720 TTCTTCTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 779 Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202 |||||||||||||| |||||| ||||||||| |||||||||||||||||||||||||||| Sbjct 780 TGAAAAGCACTTTGAAAAGAGGGTTAAAAAGTACGTGAAATTGTTGAAAGGGAAGCGCTT 839 Query 203 GCAACCAGACTTGC 216 | ||||||||||| Sbjct 840 GTGACCAGACTTGC 853 >seq23 Length=344 Score = 277 bits (306), Expect = 7e-72 Identities = 270/340 (79%), Gaps = 11/340 (3%) Strand=Plus/Plus Query 262 TCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGG 321 ||||||||||||| | | | ||| | |||||| |||||| ||||| || || ||| Sbjct 15 TCAGGCCAGCATCGGTTTCGCCGGGGGACAAAAGGCTTCGGGAACGTGGCTCCTTT-GGG 73 Query 322 GGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGCTAG 381 | ||||||||||||| | | ||| | || || |||| || | ||||||| |||| || Sbjct 74 GAGTGTTATAGCCCGTTGCGTAATACC-CCGGCGGGGACCGACGACCGCGCTTCGGCAAG 132 Query 382 GATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACAT 441 ||||||||||||||||| | |||| ||||||||| ||| |||||| ||||||| | ||| Sbjct 133 GATGCTGGCGTAATGGTCATCAGCGACCCGTCTTG-AACCCGGACCGAGGAGTCAAGCAT 191 Query 442 CTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAAC 501 ||||||||||||||||| ||||||| ||||||||||||||||||| ||||| || | Sbjct 192 TAGTGCGAGTGTTTGGGTGTAAAACCCGC-CGCGTAATGAAAGTGAACGTAGGTGAGAGC 250 Query 502 CCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCA-T 560 || ||| ||||||||||||||||||| |||||| ||||||||||| ||||| | Sbjct 251 TTC----GGCGCATCATCGACCGATCCTGATGTTTTCGGAAGGATTTGAGTAGGAGCATT 306 Query 561 AGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATA 600 | | |||| |||||||||||||||||||| | |||||| Sbjct 307 AACGCTTGG--CCCGAAAGATGGTGAACTATACTTGAATA 344 >seq24 Length=535 Score = 185 bits (204), Expect = 4e-44 Identities = 108/112 (96%), Gaps = 0/112 (0%) Strand=Plus/Minus Query 572 CCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGC 631 |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| Sbjct 535 CCCGAAAGATGGTGAACTATACTTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGC 476 Query 632 TCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 |||||||||||||| |||||||||||||||||||||||| |||||||||||| Sbjct 475 TCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGAGTATAGGGGCGA 424 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079849270850