Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734345.1_202014-07-28] 7,027 sequences; 36,982,960 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq146 226 5e-57 seq3180 159 6e-37 seq6295 93.3 7e-17 >seq146 Length=331 Score = 226 bits (250), Expect = 5e-57 Identities = 153/166 (92%), Gaps = 4/166 (2%) Strand=Plus/Minus Query 94 AGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACCATAGTCGATG-GGGCTATTTAGCAG 152 |||| ||||||||||||||||||| ||| || ||| || ||| | |||||||||||||| Sbjct 331 AGCCGATAGTCCCTCTAAGAAGCC-GCCGCCG-CCAAAG-CGACGCGGGCTATTTAGCAG 275 Query 153 GTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGG 212 |||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct 274 GTTAAGGTCTCGTTCGTTATCGCAATTAAGCAGACAAATCACTCCACCAACTAAGAACGG 215 Query 213 CCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||||||||||||||| ||||||||||||||| |||||||||| Sbjct 214 CCATGCACCACCACCCATAAAATCAAGAAAGAGCTCTCAATCTGTC 169 >seq3180 Length=500 Score = 159 bits (176), Expect = 6e-37 Identities = 109/119 (92%), Gaps = 3/119 (3%) Strand=Plus/Plus Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61 ||||| ||||| |||||||||||||||||||||||||||||||| |||||||| ||||| Sbjct 377 ACTCGCTGGCTGTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATC-AAGGGCAT-ACAGA 434 Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120 |||||||||||||||||||||||| |||| | |||| ||||||||||||||||||| || Sbjct 435 CCTGTTATTGCCTCAAACTTCCATCGGCTTG-AGCCGATAGTCCCTCTAAGAAGCCGGC 492 >seq6295 Length=10113 Score = 93.3 bits (102), Expect = 7e-17 Identities = 76/91 (84%), Gaps = 6/91 (7%) Strand=Plus/Plus Query 150 CAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAA-----TCACT-CCACCAAC 203 ||||| | ||||||||||||||||| ||||| |||||||| ||||| || | ||| Sbjct 9574 CAGGTCAGGGTCTCGTTCGTTATCGCCATTAAGCAGACAAACGGGATCACTTCCGCAAAC 9633 Query 204 TAAGAACGGCCATGCACCACCACCCATAGAA 234 ||||||||||||||||||||| |||||| || Sbjct 9634 TAAGAACGGCCATGCACCACCGCCCATAAAA 9664 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796745758587