Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734395.1_202014-07-28] 8,371 sequences; 36,788,781 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq52 520 4e-145 seq1192 165 3e-38 >seq52 Length=928 Score = 520 bits (576), Expect = 4e-145 Identities = 448/541 (83%), Gaps = 15/541 (3%) Strand=Plus/Minus Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82 ||| |||||||||||||||||||||| |||||||||||| |||||||||||||||||||| Sbjct 542 TGTAAAGCTCCTTCGACGAGTCGAGTAGTTTGGGAATGCTGCTCTAAATGGGAGGTAAAT 483 Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142 |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 482 TTCTTCTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 423 Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202 |||||||||||||| |||||| ||||||||| ||||||||||||||||| |||||||||| Sbjct 422 TGAAAAGCACTTTGAAAAGAGGGTTAAAAAGTACGTGAAATTGTTGAAA-GGAAGCGCTT 364 Query 203 GCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCGGTGCACT-CTTCTGCGG 261 | ||||||||||| | | | ||| | | ||| || |||||||| | | | | Sbjct 363 GTGACCAGACTTGCGCCGGGCGGATCATCAGCGTTCTC-GCTGGTGCACTCCGCCCGGGT 305 Query 262 TCAGGCCAGCATCAG--CTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCG 319 ||||||||||||| | ||| ||| ||| |||||| |||||| ||||| || |||| Sbjct 304 TCAGGCCAGCATCGGTTTTCGCCCGG-GGGACAAAGGCTTCGGGAACGTGGCTCCTTTCG 246 Query 320 GGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGCT 379 ||| ||| ||||||||| | | ||| | || || |||| || | ||||||| |||| Sbjct 245 GGGAGTG-TATAGCCCGTTGCGTAATAC-CCCGGCGGGGACCGACGACCGCGCT-CGGC- 190 Query 380 AGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAAC 439 ||| ||||||||||||||| | |||| ||||||||| |||||||||| ||||||| | | Sbjct 189 AGG-TGCTGGCGTAATGGTCATCAGCGACCCGTCTTGAAACACGGACCGAGGAGTCAAGC 131 Query 440 ATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGA 499 || ||||||||||||||||| ||||||| ||||||||||||||||||| ||||| || Sbjct 130 ATTAGTGCGAGTGTTTGGGTGTAAAACCCGCACGCGTAATGAAAGTGAACGTAGGTGAGA 71 Query 500 ACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCA 559 | || ||| ||||||||||||||||||| |||||| ||||||||||| ||||| Sbjct 70 ----GCTTCGGCGCATCATCGACCGATCCTGATGTTTTCGGAAGGATTTGAGTAGGAGCA 15 Query 560 T 560 | Sbjct 14 T 14 >seq1192 Length=537 Score = 165 bits (182), Expect = 3e-38 Identities = 104/110 (95%), Gaps = 2/110 (2%) Strand=Plus/Minus Query 572 CCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGC 631 |||||||||||||||||||| | |||||||| |||||||||||||||||||||||||||| Sbjct 537 CCCGAAAGATGGTGAACTATACTTGAATAGG-TGAAGCCAGAGGAAACTCTGGTGGAGGC 479 Query 632 TCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGC 681 |||||||||||||| ||| |||||||||||||||||||| |||||||||| Sbjct 478 TCGCAGCGGTTCTGACGT-CAAATCGATCGTCAAATTTGAGTATAGGGGC 430 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079820442050