Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734395.1_202014-07-28]
8,371 sequences; 36,788,781 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq52 520 4e-145
seq1192 165 3e-38
>seq52
Length=928
Score = 520 bits (576), Expect = 4e-145
Identities = 448/541 (83%), Gaps = 15/541 (3%)
Strand=Plus/Minus
Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82
||| |||||||||||||||||||||| |||||||||||| ||||||||||||||||||||
Sbjct 542 TGTAAAGCTCCTTCGACGAGTCGAGTAGTTTGGGAATGCTGCTCTAAATGGGAGGTAAAT 483
Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 482 TTCTTCTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 423
Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202
|||||||||||||| |||||| ||||||||| ||||||||||||||||| ||||||||||
Sbjct 422 TGAAAAGCACTTTGAAAAGAGGGTTAAAAAGTACGTGAAATTGTTGAAA-GGAAGCGCTT 364
Query 203 GCAACCAGACTTGCCCGCAGTTGCTCAACCGGCCCCTCGGCCGGTGCACT-CTTCTGCGG 261
| ||||||||||| | | | ||| | | ||| || |||||||| | | | |
Sbjct 363 GTGACCAGACTTGCGCCGGGCGGATCATCAGCGTTCTC-GCTGGTGCACTCCGCCCGGGT 305
Query 262 TCAGGCCAGCATCAG--CTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCG 319
||||||||||||| | ||| ||| ||| |||||| |||||| ||||| || ||||
Sbjct 304 TCAGGCCAGCATCGGTTTTCGCCCGG-GGGACAAAGGCTTCGGGAACGTGGCTCCTTTCG 246
Query 320 GGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGCT 379
||| ||| ||||||||| | | ||| | || || |||| || | ||||||| ||||
Sbjct 245 GGGAGTG-TATAGCCCGTTGCGTAATAC-CCCGGCGGGGACCGACGACCGCGCT-CGGC- 190
Query 380 AGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAAC 439
||| ||||||||||||||| | |||| ||||||||| |||||||||| ||||||| | |
Sbjct 189 AGG-TGCTGGCGTAATGGTCATCAGCGACCCGTCTTGAAACACGGACCGAGGAGTCAAGC 131
Query 440 ATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGA 499
|| ||||||||||||||||| ||||||| ||||||||||||||||||| ||||| ||
Sbjct 130 ATTAGTGCGAGTGTTTGGGTGTAAAACCCGCACGCGTAATGAAAGTGAACGTAGGTGAGA 71
Query 500 ACCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCA 559
| || ||| ||||||||||||||||||| |||||| ||||||||||| |||||
Sbjct 70 ----GCTTCGGCGCATCATCGACCGATCCTGATGTTTTCGGAAGGATTTGAGTAGGAGCA 15
Query 560 T 560
|
Sbjct 14 T 14
>seq1192
Length=537
Score = 165 bits (182), Expect = 3e-38
Identities = 104/110 (95%), Gaps = 2/110 (2%)
Strand=Plus/Minus
Query 572 CCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGC 631
|||||||||||||||||||| | |||||||| ||||||||||||||||||||||||||||
Sbjct 537 CCCGAAAGATGGTGAACTATACTTGAATAGG-TGAAGCCAGAGGAAACTCTGGTGGAGGC 479
Query 632 TCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGC 681
|||||||||||||| ||| |||||||||||||||||||| ||||||||||
Sbjct 478 TCGCAGCGGTTCTGACGT-CAAATCGATCGTCAAATTTGAGTATAGGGGC 430
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079820442050
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |