Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734395.1_202014-07-28]
8,371 sequences; 36,788,781 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq1 150 3e-34
seq4618 93.3 7e-17
>seq1
Length=482
Score = 150 bits (166), Expect = 3e-34
Identities = 97/105 (92%), Gaps = 1/105 (1%)
Strand=Plus/Minus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| ||||| |||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 104 ACTCGCTGGCTGTGTCAGTGTAGCGCGCGTGTGGCCCAGAACATCTAAGGGCATCACAGA 45
Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCC 106
|||||||||||||||||||||||| |||| | |||| ||||||||
Sbjct 44 CCTGTTATTGCCTCAAACTTCCATCGGCTTG-AGCCGATAGTCCC 1
>seq4618
Length=9875
Score = 93.3 bits (102), Expect = 7e-17
Identities = 76/91 (84%), Gaps = 6/91 (7%)
Strand=Plus/Minus
Query 150 CAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAA-----TCACT-CCACCAAC 203
||||| | ||||||||||||||||| ||||| |||||||| ||||| || | |||
Sbjct 280 CAGGTCAGGGTCTCGTTCGTTATCGCCATTAAGCAGACAAACGGGATCACTTCCGCAAAC 221
Query 204 TAAGAACGGCCATGCACCACCACCCATAGAA 234
||||||||||||||||||||| |||||| ||
Sbjct 220 TAAGAACGGCCATGCACCACCGCCCATAAAA 190
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796735384251
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |