Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734395.1_202014-07-28]
8,371 sequences; 36,788,781 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq1 356 4e-96
seq4435 75.2 2e-11
>seq1
Length=482
Score = 356 bits (394), Expect = 4e-96
Identities = 229/248 (92%), Gaps = 3/248 (1%)
Strand=Plus/Plus
Query 81 GGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAG 140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 GGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAG 60
Query 141 ATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGG 200
|||||||||||| ||||||||||||||||||| ||||| ||||| | | |||||||||
Sbjct 61 ATGTTCTGGGCCACACGCGCGCTACACTGACACAGCCAGCGAGTCCTT--CCTTGGCCGA 118
Query 201 AAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGC 260
||| | |||||||||||||||||| ||||| | ||||||||||||||||||||||||||
Sbjct 119 GAGGCCCGGGTAATCTTGTTAAACTGTGTCG-GGTGGGGATAGAGCATTGCAATTATTGC 177
Query 261 TCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGC 320
||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||||
Sbjct 178 TCTTCAACGAGGAATCCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGTCCCTGC 237
Query 321 CCTTTGTA 328
||||||||
Sbjct 238 CCTTTGTA 245
>seq4435
Length=11797
Score = 75.2 bits (82), Expect = 2e-11
Identities = 63/75 (84%), Gaps = 3/75 (4%)
Strand=Plus/Minus
Query 164 ACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAA 223
||||||||| ||||| ||||| | || |||||||| || | ||||||||||||||||
Sbjct 4926 ACACTGACACAGCCAGCGAGTCCTTC--CTTGGCCGAGAGCCC-GGGTAATCTTGTTAAA 4870
Query 224 CTCTGTCGTGCTGGG 238
|| ||||||||||||
Sbjct 4869 CTGTGTCGTGCTGGG 4855
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947120709888
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |