Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734395.1_202014-07-28] 8,371 sequences; 36,788,781 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq28 500 3e-139 seq36 228 3e-57 >seq28 Length=685 Score = 500 bits (554), Expect = 3e-139 Identities = 324/353 (92%), Gaps = 4/353 (1%) Strand=Plus/Minus Query 190 AGTaaaaaaaCGATAAGG-GTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTATT 248 ||||||||||| | ||| ||||||||||||||| |||||||| |||||||| |||| Sbjct 685 AGTAAAAAAACCAATAGGAGTAGTGGTATTTCACCGGCGCCGAA---GCTCCCACCTATT 629 Query 249 CTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTT 308 ||||||||| | ||| |||||||| ||| ||||||||||||||||||||||||||||| Sbjct 628 CTACACCTCCTATGTCTTTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTCTTCTT 569 Query 309 TCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGG 368 ||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 568 TCCCCGCTGATTCTGCCAAGCCCGTTCCTTTGGCTGTGGTTTCGCTAGATAGTAGATAGG 509 Query 369 GACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTG 428 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 508 GACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTG 449 Query 429 GCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTC 488 | |||||||||||||||||||| |||||||||||||||||||||||||| |||| ||| Sbjct 448 GATACCTTAAGAGAGTCATAGTCACTCCCGCCGTTTACCCGCGCTTGGTCAAATTACTTT 389 Query 489 ACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTC 541 || ||||||||||||||||||||||||||||||||||||||||| | ||||| Sbjct 388 GCTGTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACACCGCTTTC 336 >seq36 Length=320 Score = 228 bits (252), Expect = 3e-57 Identities = 159/180 (88%), Gaps = 2/180 (1%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| ||||| |||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 178 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGCCCCCCTTAGGACACCTGCGTTATG 119 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| || Sbjct 118 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCGGGTC 59 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186 ||||||||||||| |||| |||||| ||| || || |||| |||||| || || Sbjct 58 CGCCCGCGAAGGACGTTAAAACCAGAAGTTGGACG--TAAATCCAGCCCCGCTTAATCGA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635063117408