Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734395.1_202014-07-28]
8,371 sequences; 36,788,781 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq28 500 3e-139
seq36 228 3e-57
>seq28
Length=685
Score = 500 bits (554), Expect = 3e-139
Identities = 324/353 (92%), Gaps = 4/353 (1%)
Strand=Plus/Minus
Query 190 AGTaaaaaaaCGATAAGG-GTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTATT 248
||||||||||| | ||| ||||||||||||||| |||||||| |||||||| ||||
Sbjct 685 AGTAAAAAAACCAATAGGAGTAGTGGTATTTCACCGGCGCCGAA---GCTCCCACCTATT 629
Query 249 CTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTT 308
||||||||| | ||| |||||||| ||| |||||||||||||||||||||||||||||
Sbjct 628 CTACACCTCCTATGTCTTTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTCTTCTT 569
Query 309 TCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGG 368
||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 568 TCCCCGCTGATTCTGCCAAGCCCGTTCCTTTGGCTGTGGTTTCGCTAGATAGTAGATAGG 509
Query 369 GACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTG 428
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 508 GACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTG 449
Query 429 GCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTC 488
| |||||||||||||||||||| |||||||||||||||||||||||||| |||| |||
Sbjct 448 GATACCTTAAGAGAGTCATAGTCACTCCCGCCGTTTACCCGCGCTTGGTCAAATTACTTT 389
Query 489 ACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTC 541
|| ||||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct 388 GCTGTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACACCGCTTTC 336
>seq36
Length=320
Score = 228 bits (252), Expect = 3e-57
Identities = 159/180 (88%), Gaps = 2/180 (1%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
|||||| ||||| |||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 178 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGCCCCCCTTAGGACACCTGCGTTATG 119
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||
Sbjct 118 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCGGGTC 59
Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186
||||||||||||| |||| |||||| ||| || || |||| |||||| || ||
Sbjct 58 CGCCCGCGAAGGACGTTAAAACCAGAAGTTGGACG--TAAATCCAGCCCCGCTTAATCGA 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1635063117408
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |