Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734405.1_202014-07-28] 7,798 sequences; 36,113,398 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq53 134 3e-29 >seq53 Length=4162 Score = 134 bits (148), Expect = 3e-29 Identities = 202/282 (72%), Gaps = 15/282 (5%) Strand=Plus/Minus Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 66 || |||| |||| ||||| ||| ||||||||||||||| | |||||||| Sbjct 1898 TAAACTGTATCTGCACAGTTATTCCAATTTCACTGAGTCAATCATAGAGACAGCTGTTGT 1839 Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126 ||||||||| ||||| |||| | | | | ||| | | ||||| ||||||||||||||||| Sbjct 1838 ATCGTTACGTCATTCATGCAAGACCGCATTTAACGGCCAAGGCATTTCGCTACCTTAGGA 1779 Query 127 CCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGC-----TTCGC--GTT 179 || | | |||| ||||||| || ||||||| ||| || | | | ||| | || Sbjct 1778 CCCTCA-CGTTAAGGCCGCCATTAACCGGGGGTTCCTTCTACACCAACCTTTCACAATTT 1720 Query 180 AGCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACT 239 || || || |||||| |||||| ||||||| |||||| |||||| | | | Sbjct 1719 AGTTA----TTTCCGTTAACCAGCCGGCATCGGGCAGAGATCACACTCTATACTTAGATT 1664 Query 240 T-TCGTGTTT--GCAGAGTGCTGTGTTTTTAATAAACAGTCG 278 | || | ||| ||| |||||| |||||| | |||||||||| Sbjct 1663 TATCATTTTTACGCAAAGTGCTTTGTTTTAATTAAACAGTCG 1622 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260701682816