Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734405.1_202014-07-28]
7,798 sequences; 36,113,398 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq13 407 3e-111
seq5291 80.6 5e-13
>seq13
Length=709
Score = 407 bits (450), Expect = 3e-111
Identities = 276/302 (91%), Gaps = 7/302 (2%)
Strand=Plus/Minus
Query 27 ACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAGAGGGACT 86
|||||||| |||||| ||||| | ||||| |||| | |||||||||||||||||||||
Sbjct 554 ACCTTAAC-TGCTAA-TAGCCCGCGTCGCTTGGGCGCG-CGCCGGCTTCTTAGAGGGACT 498
Query 87 ATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTC 146
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 497 ATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTC 438
Query 147 TGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTC 206
||||||||||||||| |||||||||| ||||| ||||| | || |||||||| ||| |
Sbjct 437 TGGGCCGCACGCGCG-TACACTGACA-AGCCAGCGAGTCCTTC--CTTGGCCGAGAGGCC 382
Query 207 TGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCA 266
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 381 CGGGTAATCTTGTTAAACTGTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCA 322
Query 267 ACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTG 326
||||||||| |||||||||||| ||||||||| |||||||||||||||||||||||||
Sbjct 321 ACGAGGAATCCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGTCCCTGCCCTTTG 262
Query 327 TA 328
||
Sbjct 261 TA 260
>seq5291
Length=15210
Score = 80.6 bits (88), Expect = 5e-13
Identities = 64/75 (85%), Gaps = 3/75 (4%)
Strand=Plus/Minus
Query 164 ACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAA 223
||||||||| ||||| ||||| | || |||||||| ||| | ||||||||||||||||
Sbjct 8354 ACACTGACA-AGCCAGCGAGTCCTTC--CTTGGCCGAGAGGCCCGGGTAATCTTGTTAAA 8298
Query 224 CTCTGTCGTGCTGGG 238
|| ||||||||||||
Sbjct 8297 CTGTGTCGTGCTGGG 8283
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947126137344
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |