Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734405.1_202014-07-28]
7,798 sequences; 36,113,398 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq19 515 1e-143
seq12 158 4e-36
>seq19
Length=590
Score = 515 bits (570), Expect = 1e-143
Identities = 340/371 (92%), Gaps = 4/371 (1%)
Strand=Plus/Plus
Query 135 TCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGAT-ACCATGGTAGGCCACTATCCTA 193
||||| |||| ||||| |||||||||||||| | |||| || ||| | | ||
Sbjct 2 TCCGGGGTCGAGCCCTACC-CCCCGTTACCCGTTTGTCACCACGGCTGGCAAG-ACCCAG 59
Query 194 CCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTCAAGGCCATGCGA 253
|| ||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||
Sbjct 60 CCGTCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCGCAAGGCCGTGCGA 119
Query 254 TTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGTTTTTTATCTAATA 313
|||| ||||||| ||||||||||| |||||||||||||| ||||||||| ||||||||
Sbjct 120 TTCGAGAAGTTATCATGAATCACCAGTGAGCCCCGAAGGGCATTGGTTTTTAATCTAATA 179
Query 314 AATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTT 373
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 180 AATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTT 239
Query 374 ATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTT 433
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 240 ATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTT 299
Query 434 TCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATG 493
|| ||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 300 TCGCTGTATA-ATTGCTTATACTTAGACATGCATGGCTTAATCTTTAAGACAAGCATATG 358
Query 494 ACTACTGGCAG 504
|||||||||||
Sbjct 359 ACTACTGGCAG 369
>seq12
Length=682
Score = 158 bits (174), Expect = 4e-36
Identities = 133/160 (83%), Gaps = 4/160 (3%)
Strand=Plus/Minus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
|||||| ||||||||||||||||||||||||| | | |||||||||| | ||||||||
Sbjct 157 GTACTCCTTCCAATTACAAGACCCAAAAGAGCTCGG-ATCAGTATTTCTCGTCACTACAC 99
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
|| |||||| ||||||||||||||| |||||||||||||||||||||| ||||||
Sbjct 98 GCC--TGTCGGCATTGGGTAATTTGCG-GCCTGCTGCCTTCCTTGGATGTAAACGCCGTT 42
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGT 160
|||||||| ||||||| |||| |||||| | ||||
Sbjct 41 TCTCAGGCGTTTTCTCCGGGGTCGAGCCCTAACCCTCCGT 2
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1510282219008
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |