Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734425.1_202014-07-28]
8,649 sequences; 36,315,912 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq131 206 4e-51
>seq131
Length=2494
Score = 206 bits (228), Expect = 4e-51
Identities = 221/279 (79%), Gaps = 10/279 (4%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| | |||||| |||||||||||||||| |||| ||| ||||||
Sbjct 1305 GTACGAGAGGAACCGCTCA-TTCAGA-TAATTGGTTTTTGCGGTTGTCCGACAGGGCAGT 1248
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
|||||||||||||||||||| |||| | |||| |||||||||||||| |||||| |||||
Sbjct 1247 GCCGCGAAGCTACCATCTGCAGGATAACGGCT-AACGCCTCTAAGTCGGAATCCTTGCCA 1189
Query 121 GAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAAC 180
||||| | ||| | |||| ||| | ||| |||||| ||||||||||||||| || |
Sbjct 1188 GAACGCGACGATAC-CTCC-CCACGT-TTAGACGGATAAGAATAGGCTTCGGCCTCGTAT 1132
Query 181 CTTAGCAGGCCGGCAACGGGCGTCCCGC-GGAAGCGCGGGGCGCTCAGCTGGCGGATTGC 239
|| |||||| || ||| || | || ||||||| || | | | | ||| ||||
Sbjct 1131 CTCAGCAGG-CGATAAC-CCCGCCGGGCTCGAAGCGCCCGGTGGTGA-TTCGCGTATTGT 1075
Query 240 AATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
||||| || |||| ||| ||||||||||||||||||
Sbjct 1074 AATTTTGACACGCGCGGGGTCAAATCCTTTGCAGACGAC 1036
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819131361536
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |