Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734455.1_202014-07-28]
8,119 sequences; 36,391,227 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq8 684 0.0
>seq8
Length=1504
Score = 684 bits (758), Expect = 0.0
Identities = 559/662 (84%), Gaps = 20/662 (3%)
Strand=Plus/Plus
Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82
||| |||||||||||||||||||||| |||||||||||| ||||||||||||||||||||
Sbjct 433 TGTAAAGCTCCTTCGACGAGTCGAGTAGTTTGGGAATGCTGCTCTAAATGGGAGGTAAAT 492
Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 493 TTCTTCTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 552
Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202
|||||||||||||| |||||| |||||| || ||||||||||||||||||||||||||||
Sbjct 553 TGAAAAGCACTTTGAAAAGAGGGTTAAAGAGTACGTGAAATTGTTGAAAGGGAAGCGCTT 612
Query 203 GCAACCAGACTTGCCCGCAGTTGCTCAACCGGC-CCCTCGGCCGGTGCACTCTTCTGCGG 261
| ||||||||||| | | | ||| || || ||| || ||||||||| | ||
Sbjct 613 GTGACCAGACTTGCGCCGGGCGGATCATCCAGCGTTCTC-GCTGGTGCACTC-CCCCCGT 670
Query 262 TCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGG 321
||||||||||||| | | || | ||| |||||| |||||| ||||| || ||||||
Sbjct 671 TCAGGCCAGCATC-GTTTTTGCCGGGGGACAAAGGCTTCGGGAACGTGGCTCCTTTCGGG 729
Query 322 GGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGCTAG 381
| ||||||||||||| | | ||| | ||||| |||| || | ||||||| |||| ||
Sbjct 730 GAGTGTTATAGCCCGTTGCGTAATAC--CCCGCGGGGACCGACGACCGCGCTTCGGCAAG 787
Query 382 GATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACAT 441
||||||||||||||||| | |||| ||||||| |||||||| || ||||||| | |||
Sbjct 788 GATGCTGGCGTAATGGTCATCAGCG--CCGTCTT-GAACACGG-CCCAGGAGTCAAGCAT 843
Query 442 CTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAAC 501
||||||||||||||||| ||||||| ||||||||||||||||||| ||||| ||
Sbjct 844 TAGTGCGAGTGTTTGGGTGTAAAACCCGCACGCGTAATGAAAGTGAACGTAGGTGAGA-- 901
Query 502 CCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCA-- 559
| || ||| ||||||||||||||||||| |||||| ||||||||||| |||||
Sbjct 902 --GCTTCGGCGCATCATCGACCGATCCTGATGTTTTCGGAAGGATTTGAGTAGGAGCAAT 959
Query 560 TAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAAC 619
|| | | | ||||||||||||||||||||||| | |||||||||||||||||||||||||
Sbjct 960 TAAC-GCTTGGACCCGAAAGATGGTGAACTATACTTGAATAGGGTGAAGCCAGAGGAAAC 1018
Query 620 TCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGG 679
|||||||||||| |||| ||||| || |||||||||||||||||||||||| ||||||||
Sbjct 1019 TCTGGTGGAGGC-CGCA-CGGTT-TGACGTGCAAATCGATCGTCAAATTTGAGTATAGGG 1075
Query 680 GC 681
||
Sbjct 1076 GC 1077
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079825847450
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |