Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734455.1_202014-07-28]
8,119 sequences; 36,391,227 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq109 206 4e-51
>seq109
Length=578
Score = 206 bits (228), Expect = 4e-51
Identities = 222/282 (79%), Gaps = 14/282 (5%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| | |||||| |||||||||||||||| |||| ||| ||||||
Sbjct 396 GTACGAGAGGAACCGCTCA-TTCAGA-TAATTGGTTTTTGCGGTTGTCCGACAGGGCAGT 339
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120
|||||||||||||||||||| |||| | ||||| ||||||||||||| |||||| |||||
Sbjct 338 GCCGCGAAGCTACCATCTGCAGGATAACGGCTG-ACGCCTCTAAGTCGGAATCCTTGCCA 280
Query 121 GAACGG-GGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAA 179
|||||| | ||| | |||| |||| | ||| |||||| ||||||||||||||| || |
Sbjct 279 GAACGGCGACGATAC-CTCCCGCACGT-TTAGACGGATAAGAATAGGCTTCGGCCTCGTA 222
Query 180 CCTTAGCAGGCCGGCAACGGGCGTCCCGC-GGAAGCG--CGGGGCGCTCAGCTGGCGGAT 236
|| ||||||| ||| || | || |||||| || || | | | ||| ||
Sbjct 221 TCTCAGCAGGCGAATAAC-CCCGCCGGGCTCGAAGCGCCCGTGGTGAT----TCGCGTAT 167
Query 237 TGCAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
|| ||||| || |||| ||| ||||||||||||||||||
Sbjct 166 TGTAATTTTGACACGCGCGGGGTCAAATCCTTTGCAGACGAC 125
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819135567616
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |