Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734495.1_202014-07-28]
7,725 sequences; 36,288,354 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq19 354 1e-95
seq3313 93.3 7e-17
>seq19
Length=1139
Score = 354 bits (392), Expect = 1e-95
Identities = 237/259 (92%), Gaps = 4/259 (2%)
Strand=Plus/Minus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 438 ACTCGCTGGCTGTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 379
Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCC 121
|||||||||||||||||||||||| |||| || ||| ||||||||||||||||||| ||
Sbjct 378 CCTGTTATTGCCTCAAACTTCCATCGGCTTGA-GCCGATAGTCCCTCTAAGAAGCCGGCG 320
Query 122 ACCAACCATAGTCGATG-GGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 180
| ||| || ||| | |||||||||||||||||||||||||||||||||||| |||||
Sbjct 319 CGCCGCCAAAG-CGACGCGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGCAATTA 261
Query 181 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACC-ACCCATAGAATCAAG 239
| |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||
Sbjct 260 AGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCTACCCATAAAATCAAG 201
Query 240 AAAGAGCTATCAATCTGTC 258
|||||||| ||||||||||
Sbjct 200 AAAGAGCTCTCAATCTGTC 182
>seq3313
Length=10059
Score = 93.3 bits (102), Expect = 7e-17
Identities = 76/91 (84%), Gaps = 6/91 (7%)
Strand=Plus/Minus
Query 150 CAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAA-----TCACT-CCACCAAC 203
||||| | ||||||||||||||||| ||||| |||||||| ||||| || | |||
Sbjct 461 CAGGTCAGGGTCTCGTTCGTTATCGCCATTAAGCAGACAAACGGGATCACTTCCGCAAAC 402
Query 204 TAAGAACGGCCATGCACCACCACCCATAGAA 234
||||||||||||||||||||| |||||| ||
Sbjct 401 TAAGAACGGCCATGCACCACCGCCCATAAAA 371
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796740370725
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |