Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734515.1_202014-07-28]
7,603 sequences; 36,446,887 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq40 536 4e-150
seq29 205 3e-50
>seq40
Length=599
Score = 536 bits (594), Expect = 4e-150
Identities = 343/372 (92%), Gaps = 1/372 (0%)
Strand=Plus/Plus
Query 133 TCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGGCCACTATCCT 192
||||||| |||| |||||| | ||||||||||||| |||| || ||||| | ||
Sbjct 6 TCTCCGGGGTCGAGCCCTAACCCTCCGTTACCCGTTGTCACCACGGCTGGCCAAGACCCA 65
Query 193 ACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTCAAGGCCATGCG 252
|| ||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||
Sbjct 66 GCCGTCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCGCAAGGCCGTGCG 125
Query 253 ATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGTTTTTTATCTAAT 312
||||| ||||||| ||||||||||| |||||||||||||| ||||||||| |||||||
Sbjct 126 ATTCGAGAAGTTATCATGAATCACCAGTGAGCCCCGAAGGGCATTGGTTTTTAATCTAAT 185
Query 313 AAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGT 372
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 186 AAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGT 245
Query 373 TATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGT 432
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 246 TATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGT 305
Query 433 TTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATAT 492
||| ||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 306 TTCGCTGTATA-ATTGCTTATACTTAGACATGCATGGCTTAATCTTTAAGACAAGCATAT 364
Query 493 GACTACTGGCAG 504
||||||||||||
Sbjct 365 GACTACTGGCAG 376
>seq29
Length=684
Score = 205 bits (226), Expect = 3e-50
Identities = 136/151 (90%), Gaps = 0/151 (0%)
Strand=Plus/Minus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||
Sbjct 151 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTCTCGTCACTACCT 92
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
| ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 91 CGCCGTGTCGGCATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTAAACGCCGTT 32
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTA 151
|||||||| ||||||| |||| |||||
Sbjct 31 TCTCAGGCGTTTTCTCCGGGGTCGAGCCCTA 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1510285164288
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |