Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734555.1_202014-07-28] 9,452 sequences; 35,613,849 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq48 132 1e-28 >seq48 Length=3300 Score = 132 bits (146), Expect = 1e-28 Identities = 202/283 (71%), Gaps = 16/283 (6%) Strand=Plus/Minus Query 7 TACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCC 66 || |||| |||| ||||| ||| ||||||||||||||| | |||||||| Sbjct 1036 TAAACTGTATCTGCACAGTTATTCCAATTTCACTGAGTCAATCATAGAGACAGCTGTTGT 977 Query 67 ATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGA 126 ||||||||| ||||| |||| | | | | ||| | | ||||| ||||||||||||||||| Sbjct 976 ATCGTTACGTCATTCATGCAAGACCGCATTTAACGGCCAAGGCATTTCGCTACCTTAGGA 917 Query 127 CCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGC------TTCGC--GT 178 || | | |||| ||||||| || ||||||| ||| || | | | ||| | | Sbjct 916 CCCTCA-CGTTAAGGCCGCCATTAACCGGGGGTTCCTTCTACACCAAACCTTTCACAATT 858 Query 179 TAGCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCAC 238 ||| || || |||||| |||||| ||||||| |||||| |||||| | | Sbjct 857 TAGTTA----TTTCCGTTAACCAGCCGGCATCGGGCAGAGATCACACTCTATACTTAGAT 802 Query 239 TT-TCGTGTTT--GCAGAGTGCTGTGTTTTTAATAAACAGTCG 278 || || | ||| ||| |||||| |||||| | |||||||||| Sbjct 801 TTATCATTTTTACGCAAAGTGCTTTGTTTTAATTAAACAGTCG 759 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260680829184