Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734555.1_202014-07-28]
9,452 sequences; 35,613,849 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq12 163 5e-38
seq8496 93.3 7e-17
seq11 73.4 6e-11
>seq12
Length=680
Score = 163 bits (180), Expect = 5e-38
Identities = 103/110 (94%), Gaps = 1/110 (1%)
Strand=Plus/Plus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 572 ACTCGCTGGCTGTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 631
Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAA 111
|||||||||||||||||||||||| |||| | |||| |||||||||||||
Sbjct 632 CCTGTTATTGCCTCAAACTTCCATCGGCTTG-AGCCGATAGTCCCTCTAA 680
>seq8496
Length=10054
Score = 93.3 bits (102), Expect = 7e-17
Identities = 76/91 (84%), Gaps = 6/91 (7%)
Strand=Plus/Minus
Query 150 CAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAA-----TCACT-CCACCAAC 203
||||| | ||||||||||||||||| ||||| |||||||| ||||| || | |||
Sbjct 461 CAGGTCAGGGTCTCGTTCGTTATCGCCATTAAGCAGACAAACGGGATCACTTCCGCAAAC 402
Query 204 TAAGAACGGCCATGCACCACCACCCATAGAA 234
||||||||||||||||||||| |||||| ||
Sbjct 401 TAAGAACGGCCATGCACCACCGCCCATAAAA 371
>seq11
Length=934
Score = 73.4 bits (80), Expect = 6e-11
Identities = 43/45 (96%), Gaps = 0/45 (0%)
Strand=Plus/Minus
Query 214 CATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258
|||||||||||||||||| ||||||||||||||| ||||||||||
Sbjct 934 CATGCACCACCACCCATAAAATCAAGAAAGAGCTCTCAATCTGTC 890
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796727040012
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |