Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734555.1_202014-07-28]
9,452 sequences; 35,613,849 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq12 381 1e-103
seq9161 82.4 1e-13
>seq12
Length=680
Score = 381 bits (422), Expect = 1e-103
Identities = 237/253 (94%), Gaps = 2/253 (1%)
Strand=Plus/Minus
Query 76 TTAGAGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCC 135
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 680 TTAGAGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCC 621
Query 136 CTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTG 195
||||||||||||||||||||||||||||||||||||| ||||| ||||| | || ||||
Sbjct 620 CTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACACAGCCAGCGAGTCCTTC--CTTG 563
Query 196 GCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATT 255
|||| ||| | |||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 562 GCCGAGAGGCCCGGGTAATCTTGTTAAACTGTGTCGTGCTGGGGATAGAGCATTGCAATT 503
Query 256 ATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTC 315
|||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||
Sbjct 502 ATTGCTCTTCAACGAGGAATCCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGTC 443
Query 316 CCTGCCCTTTGTA 328
|||||||||||||
Sbjct 442 CCTGCCCTTTGTA 430
>seq9161
Length=16585
Score = 82.4 bits (90), Expect = 1e-13
Identities = 63/74 (85%), Gaps = 2/74 (3%)
Strand=Plus/Plus
Query 165 CACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAAC 224
|||||||| ||||| ||||| | || |||||||| ||| | |||||||||||||||||
Sbjct 8215 CACTGACACAGCCAGCGAGTCCTTC--CTTGGCCGAGAGGCCCGGGTAATCTTGTTAAAC 8272
Query 225 TCTGTCGTGCTGGG 238
| ||||||||||||
Sbjct 8273 TGTGTCGTGCTGGG 8286
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947110470656
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |