Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734555.1_202014-07-28]
9,452 sequences; 35,613,849 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq13 704 0.0
>seq13
Length=1943
Score = 704 bits (780), Expect = 0.0
Identities = 480/536 (90%), Gaps = 8/536 (1%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
|||||| ||||| |||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 864 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGCTCCCCTTAGGACACCTGCGTTATG 805
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||
Sbjct 804 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCGGGTC 745
Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186
||||||||||||| |||| |||||| ||| || || |||| |||||| || ||
Sbjct 744 CGCCCGCGAAGGACGTTAAAACCAGAAGTTGGACGT--AAATCCAGCCCCGCTTAATCGA 687
Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246
|||||||||||| ||| | ||||||||||||||| |||||||| |||| | ||
Sbjct 686 ATAAGTAAAAAAAA-ATAGGAGTAGTGGTATTTCACCGGCGCCGAAG----TCCCCCGTA 632
Query 247 TTCTA-CACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTT 305
||| | |||||| | ||| |||||||| ||| ||||||||||||||||||||||||||
Sbjct 631 TTCCAACACCTCCTATGTCTTTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTCTT 572
Query 306 CTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGAT 365
|||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||
Sbjct 571 CTTTCCCCGCTGATTCTGCCAAGCCCGTTCCTTTGGCTGTGGTTTCGCTAGATAGTAGAT 512
Query 366 AGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCAT 425
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 511 AGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGGCGAGGCAT 452
Query 426 TTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTC 485
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
Sbjct 451 TTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTCAAATTGC 392
Query 486 TTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTC 541
|| || ||||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct 391 TTTGCTGTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACACCGCTTTC 336
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1635045440896
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |