Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734575.1_202014-07-28] 7,624 sequences; 35,571,426 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq19 228 3e-57 seq1707 172 2e-40 >seq19 Length=279 Score = 228 bits (252), Expect = 3e-57 Identities = 207/257 (81%), Gaps = 3/257 (1%) Strand=Plus/Plus Query 238 CTCGGCCGGTGCACTCTTCTGCGGTCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGC 297 |||||| ||||||||| | || ||||||||||||| | | | ||| ||| |||||| Sbjct 26 CTCGGCTGGTGCACTCCCCC-CGTTCAGGCCAGCATCGGTTTCGCCGGG-GGACAAAGGC 83 Query 298 CCCGGGAATGTGGCCCCCTTCGGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTG 357 |||||| ||||| || ||||||| ||||||||||||| | | ||| | || || | Sbjct 84 TTCGGGAACGTGGCTCCTTTCGGGGAGTGTTATAGCCCGTTGCGTAATACC-CCGGCGGG 142 Query 358 GACTGAGGTCCGCGCTCCGGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGG 417 ||| || | ||||||| |||| ||||||||||||||||||| | |||| ||||||||| Sbjct 143 GACCGACGACCGCGCTTCGGCAAGGATGCTGGCGTAATGGTCATCAGCGACCCGTCTTGA 202 Query 418 AACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTA 477 |||||||||| ||||||| | ||| ||||||||||||||||| ||||||| |||||| Sbjct 203 AACACGGACCGAGGAGTCAAGCATTAGTGCGAGTGTTTGGGTGTAAAACCCGCACGCGTA 262 Query 478 ATGAAAGTGAACGGAGG 494 ||||||||||||| ||| Sbjct 263 ATGAAAGTGAACGTAGG 279 >seq1707 Length=598 Score = 172 bits (190), Expect = 2e-40 Identities = 105/110 (95%), Gaps = 1/110 (1%) Strand=Plus/Plus Query 572 CCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGC 631 |||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||| Sbjct 1 CCCGAAAGATGGTGAACTATACTTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGC 60 Query 632 TCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGC 681 | |||||||||||| |||||||||||||||||||||||| |||||||||| Sbjct 61 T-GCAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGAGTATAGGGGC 109 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079836465200