Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734575.1_202014-07-28]
7,624 sequences; 35,571,426 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq19 228 3e-57
seq1707 172 2e-40
>seq19
Length=279
Score = 228 bits (252), Expect = 3e-57
Identities = 207/257 (81%), Gaps = 3/257 (1%)
Strand=Plus/Plus
Query 238 CTCGGCCGGTGCACTCTTCTGCGGTCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGC 297
|||||| ||||||||| | || ||||||||||||| | | | ||| ||| ||||||
Sbjct 26 CTCGGCTGGTGCACTCCCCC-CGTTCAGGCCAGCATCGGTTTCGCCGGG-GGACAAAGGC 83
Query 298 CCCGGGAATGTGGCCCCCTTCGGGGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTG 357
|||||| ||||| || ||||||| ||||||||||||| | | ||| | || || |
Sbjct 84 TTCGGGAACGTGGCTCCTTTCGGGGAGTGTTATAGCCCGTTGCGTAATACC-CCGGCGGG 142
Query 358 GACTGAGGTCCGCGCTCCGGCTAGGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGG 417
||| || | ||||||| |||| ||||||||||||||||||| | |||| |||||||||
Sbjct 143 GACCGACGACCGCGCTTCGGCAAGGATGCTGGCGTAATGGTCATCAGCGACCCGTCTTGA 202
Query 418 AACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTA 477
|||||||||| ||||||| | ||| ||||||||||||||||| ||||||| ||||||
Sbjct 203 AACACGGACCGAGGAGTCAAGCATTAGTGCGAGTGTTTGGGTGTAAAACCCGCACGCGTA 262
Query 478 ATGAAAGTGAACGGAGG 494
||||||||||||| |||
Sbjct 263 ATGAAAGTGAACGTAGG 279
>seq1707
Length=598
Score = 172 bits (190), Expect = 2e-40
Identities = 105/110 (95%), Gaps = 1/110 (1%)
Strand=Plus/Plus
Query 572 CCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGC 631
|||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||
Sbjct 1 CCCGAAAGATGGTGAACTATACTTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGC 60
Query 632 TCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGC 681
| |||||||||||| |||||||||||||||||||||||| ||||||||||
Sbjct 61 T-GCAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGAGTATAGGGGC 109
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079836465200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |