Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734595.1_202014-07-28]
7,786 sequences; 36,384,190 total letters
Query= AAMG01000190.1
Length=117
Score E
Sequences producing significant alignments: (Bits) Value
seq6778 134 8e-30
seq15 98.7 6e-19
seq5 75.2 6e-12
>seq6778
Length=4736
Score = 134 bits (148), Expect = 8e-30
Identities = 103/118 (87%), Gaps = 3/118 (3%)
Strand=Plus/Minus
Query 1 GAACCCAAAGACTTTGA-TTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCC 59
||||||| | |||| | |||| |||||||||||| || ||||||| |||||| || |
Sbjct 892 GAACCCAGAAACTTGTACTTTCGTGTAAGGTGCCGAACGGGTCAAAAA-ATAACACCGTC 834
Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||
Sbjct 833 CGATCCCTAGTCGGCATAGTT-ATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 777
>seq15
Length=731
Score = 98.7 bits (108), Expect = 6e-19
Identities = 64/69 (93%), Gaps = 1/69 (1%)
Strand=Plus/Plus
Query 49 ATAACATCGCCCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGAT 108
|||||| || |||||||||||||||||||||||| | |||||||||||||||||||||||
Sbjct 6 ATAACACCGTCCGATCCCTAGTCGGCATAGTTTATG-TTAAGACTACGACGGTATCTGAT 64
Query 109 CGTCTTCGA 117
| |||||||
Sbjct 65 CTTCTTCGA 73
>seq5
Length=2617
Score = 75.2 bits (82), Expect = 6e-12
Identities = 65/78 (83%), Gaps = 2/78 (3%)
Strand=Plus/Minus
Query 1 GAACCCAAAGACTTTGA-TTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCC 59
||||||| | |||| | |||| |||||||||||| || ||||||| |||||| || |
Sbjct 77 GAACCCAGAAACTTGTACTTTCGTGTAAGGTGCCGAACGGGTCAAAAA-ATAACACCGTC 19
Query 60 CGATCCCTAGTCGGCATA 77
||||||||||||||||||
Sbjct 18 CGATCCCTAGTCGGCATA 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 278379678540
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |