Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734605.1_202014-07-28]
8,881 sequences; 35,967,056 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq56 351 4e-94
seq50 300 7e-79
>seq56
Length=1413
Score = 351 bits (388), Expect = 4e-94
Identities = 266/311 (86%), Gaps = 2/311 (1%)
Strand=Plus/Plus
Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82
||| |||||||||||||||||||||| |||||||||||| ||||||||||||||||||||
Sbjct 1104 TGTAAAGCTCCTTCGACGAGTCGAGTAGTTTGGGAATGCTGCTCTAAATGGGAGGTAAAT 1163
Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 1164 TTCTTCTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 1223
Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202
|||||||||||||| |||||| ||||||||| ||||||||||||||||||||||||||||
Sbjct 1224 TGAAAAGCACTTTGAAAAGAGGGTTAAAAAGTACGTGAAATTGTTGAAAGGGAAGCGCTT 1283
Query 203 GCAACCAGACTTGCCCGCAGTTGCTCAACCGGC-CCCTCGGCCGGTGCACTCTTCTGCGG 261
| ||||||||||| | | | ||| || || ||| || ||||||||| | |
Sbjct 1284 GTGACCAGACTTGCGCCGGGCGGATCATCCAGCGTTCTC-GCTGGTGCACTCCGCCCGGT 1342
Query 262 TCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGG 321
||||||||||||| | | || | ||| |||||| |||||| ||||| || ||||||
Sbjct 1343 TCAGGCCAGCATCGGTTTTCGCCGGGGGACAAAGGCTTCGGGAACGTGGCTCCTTTCGGG 1402
Query 322 GGGTGTTATAG 332
| |||||||||
Sbjct 1403 GAGTGTTATAG 1413
>seq50
Length=893
Score = 300 bits (332), Expect = 7e-79
Identities = 209/237 (88%), Gaps = 4/237 (2%)
Strand=Plus/Minus
Query 447 CGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGTG 506
||||||||||||||| ||||||| ||||||||||||||||||| ||||| || |
Sbjct 893 CGAGTGTTTGGGTGTAAAACCCGCACGCGTAATGAAAGTGAACGTAGGTGAGAGCTTC-- 836
Query 507 AGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGT 566
|| ||| ||||||||||||||||||| |||||| ||||||||||| |||||| |
Sbjct 835 --GGCGCATCATCGACCGATCCTGATGTTTTCGGAAGGATTTGAGTAGGAGCATTAACGC 778
Query 567 TGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTG 626
| ||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||
Sbjct 777 TTGGACCCGAAAGATGGTGAACTATACTTGAATAGGGTGAAGCCAGAGGAAACTCTGGTG 718
Query 627 GAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||
Sbjct 717 GAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGAGTATAGGGGCGA 661
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079809502550
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |