Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734605.1_202014-07-28] 8,881 sequences; 35,967,056 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq56 351 4e-94 seq50 300 7e-79 >seq56 Length=1413 Score = 351 bits (388), Expect = 4e-94 Identities = 266/311 (86%), Gaps = 2/311 (1%) Strand=Plus/Plus Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82 ||| |||||||||||||||||||||| |||||||||||| |||||||||||||||||||| Sbjct 1104 TGTAAAGCTCCTTCGACGAGTCGAGTAGTTTGGGAATGCTGCTCTAAATGGGAGGTAAAT 1163 Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142 |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 1164 TTCTTCTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 1223 Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202 |||||||||||||| |||||| ||||||||| |||||||||||||||||||||||||||| Sbjct 1224 TGAAAAGCACTTTGAAAAGAGGGTTAAAAAGTACGTGAAATTGTTGAAAGGGAAGCGCTT 1283 Query 203 GCAACCAGACTTGCCCGCAGTTGCTCAACCGGC-CCCTCGGCCGGTGCACTCTTCTGCGG 261 | ||||||||||| | | | ||| || || ||| || ||||||||| | | Sbjct 1284 GTGACCAGACTTGCGCCGGGCGGATCATCCAGCGTTCTC-GCTGGTGCACTCCGCCCGGT 1342 Query 262 TCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGG 321 ||||||||||||| | | || | ||| |||||| |||||| ||||| || |||||| Sbjct 1343 TCAGGCCAGCATCGGTTTTCGCCGGGGGACAAAGGCTTCGGGAACGTGGCTCCTTTCGGG 1402 Query 322 GGGTGTTATAG 332 | ||||||||| Sbjct 1403 GAGTGTTATAG 1413 >seq50 Length=893 Score = 300 bits (332), Expect = 7e-79 Identities = 209/237 (88%), Gaps = 4/237 (2%) Strand=Plus/Minus Query 447 CGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGTG 506 ||||||||||||||| ||||||| ||||||||||||||||||| ||||| || | Sbjct 893 CGAGTGTTTGGGTGTAAAACCCGCACGCGTAATGAAAGTGAACGTAGGTGAGAGCTTC-- 836 Query 507 AGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGT 566 || ||| ||||||||||||||||||| |||||| ||||||||||| |||||| | Sbjct 835 --GGCGCATCATCGACCGATCCTGATGTTTTCGGAAGGATTTGAGTAGGAGCATTAACGC 778 Query 567 TGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTG 626 | ||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| Sbjct 777 TTGGACCCGAAAGATGGTGAACTATACTTGAATAGGGTGAAGCCAGAGGAAACTCTGGTG 718 Query 627 GAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||||||||||||||||||| |||||||||||||||||||||||| |||||||||||| Sbjct 717 GAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGAGTATAGGGGCGA 661 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079809502550