Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734605.1_202014-07-28] 8,881 sequences; 35,967,056 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq56 356 4e-96 seq75 102 2e-19 seq5686 82.4 1e-13 >seq56 Length=1413 Score = 356 bits (394), Expect = 4e-96 Identities = 223/239 (93%), Gaps = 2/239 (1%) Strand=Plus/Plus Query 90 GGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGG 149 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 GGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGG 60 Query 150 GCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGG 209 ||||||||||||||||||||||| ||||| ||||| | || |||||||| ||| | || Sbjct 61 GCCGCACGCGCGCTACACTGACACAGCCAGCGAGTCCTTC--CTTGGCCGAGAGGCCCGG 118 Query 210 GTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACG 269 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 119 GTAATCTTGTTAAACTGTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACG 178 Query 270 AGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 |||||| |||||||||||| ||||||||| ||||||||||||||||||||||||||| Sbjct 179 AGGAATCCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGTCCCTGCCCTTTGTA 237 >seq75 Length=262 Score = 102 bits (112), Expect = 2e-19 Identities = 67/74 (91%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || ||||||||||||||||||||||||| | ||||||||||| |||||||||||||| Sbjct 74 GAACGAGACCTTAACCTGCTAAATAGCCCGCGTCGCTTTGGCGGCGCGCCGGCTTCTTAG 15 Query 80 AGGGACTATCGGCT 93 |||||||||||||| Sbjct 14 AGGGACTATCGGCT 1 >seq5686 Length=15208 Score = 82.4 bits (90), Expect = 1e-13 Identities = 63/74 (85%), Gaps = 2/74 (3%) Strand=Plus/Plus Query 165 CACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAAC 224 |||||||| ||||| ||||| | || |||||||| ||| | ||||||||||||||||| Sbjct 6826 CACTGACACAGCCAGCGAGTCCTTC--CTTGGCCGAGAGGCCCGGGTAATCTTGTTAAAC 6883 Query 225 TCTGTCGTGCTGGG 238 | |||||||||||| Sbjct 6884 TGTGTCGTGCTGGG 6897 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947115879168