Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734605.1_202014-07-28]
8,881 sequences; 35,967,056 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq56 356 4e-96
seq75 102 2e-19
seq5686 82.4 1e-13
>seq56
Length=1413
Score = 356 bits (394), Expect = 4e-96
Identities = 223/239 (93%), Gaps = 2/239 (1%)
Strand=Plus/Plus
Query 90 GGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGG 149
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 GGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGG 60
Query 150 GCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGG 209
||||||||||||||||||||||| ||||| ||||| | || |||||||| ||| | ||
Sbjct 61 GCCGCACGCGCGCTACACTGACACAGCCAGCGAGTCCTTC--CTTGGCCGAGAGGCCCGG 118
Query 210 GTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACG 269
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 119 GTAATCTTGTTAAACTGTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTCAACG 178
Query 270 AGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328
|||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||
Sbjct 179 AGGAATCCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGTCCCTGCCCTTTGTA 237
>seq75
Length=262
Score = 102 bits (112), Expect = 2e-19
Identities = 67/74 (91%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79
|| ||||||||||||||||||||||||| | ||||||||||| ||||||||||||||
Sbjct 74 GAACGAGACCTTAACCTGCTAAATAGCCCGCGTCGCTTTGGCGGCGCGCCGGCTTCTTAG 15
Query 80 AGGGACTATCGGCT 93
||||||||||||||
Sbjct 14 AGGGACTATCGGCT 1
>seq5686
Length=15208
Score = 82.4 bits (90), Expect = 1e-13
Identities = 63/74 (85%), Gaps = 2/74 (3%)
Strand=Plus/Plus
Query 165 CACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAAC 224
|||||||| ||||| ||||| | || |||||||| ||| | |||||||||||||||||
Sbjct 6826 CACTGACACAGCCAGCGAGTCCTTC--CTTGGCCGAGAGGCCCGGGTAATCTTGTTAAAC 6883
Query 225 TCTGTCGTGCTGGG 238
| ||||||||||||
Sbjct 6884 TGTGTCGTGCTGGG 6897
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947115879168
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |