Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734635.1_202014-07-28] 9,202 sequences; 35,774,258 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq73 107 1e-21 seq38 75.2 6e-12 >seq73 Length=1266 Score = 107 bits (118), Expect = 1e-21 Identities = 65/69 (94%), Gaps = 0/69 (0%) Strand=Plus/Plus Query 49 ATAACATCGCCCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGAT 108 |||||| || |||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 2 ATAACACCGTCCGATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGAT 61 Query 109 CGTCTTCGA 117 | ||||||| Sbjct 62 CTTCTTCGA 70 >seq38 Length=2782 Score = 75.2 bits (82), Expect = 6e-12 Identities = 65/78 (83%), Gaps = 2/78 (3%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGA-TTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCC 59 ||||||| | |||| | |||| |||||||||||| || ||||||| |||||| || | Sbjct 77 GAACCCAGAAACTTGTACTTTCGTGTAAGGTGCCGAACGGGTCAAAAA-ATAACACCGTC 19 Query 60 CGATCCCTAGTCGGCATA 77 |||||||||||||||||| Sbjct 18 CGATCCCTAGTCGGCATA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278375982780