Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734655.1_202014-07-28]
8,594 sequences; 37,097,895 total letters
Query= AAMG01000190.1
Length=117
Score E
Sequences producing significant alignments: (Bits) Value
seq5686 141 5e-32
seq18 104 1e-20
>seq5686
Length=29058
Score = 141 bits (156), Expect = 5e-32
Identities = 104/119 (87%), Gaps = 3/119 (3%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGA--TTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGC 58
||||||| | || ||| |||| |||||||||||| || ||||||| |||||| ||
Sbjct 27785 GAACCCAGAAACCTTGTACTTTCGTGTAAGGTGCCGAACGGGTCAAAAA-ATAACACCGT 27843
Query 59 CCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 27844 CCGATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 27902
>seq18
Length=708
Score = 104 bits (114), Expect = 1e-20
Identities = 60/62 (97%), Gaps = 0/62 (0%)
Strand=Plus/Plus
Query 56 CGCCCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTC 115
|| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 2 CGTCCGATCCCTAGTCGGCATAGTTTATGGTTAAGACTACGACGGTATCTGATCGTCTTC 61
Query 116 GA 117
||
Sbjct 62 GA 63
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 278377569660
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |