Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734655.1_202014-07-28]
8,594 sequences; 37,097,895 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq57 733 0.0
>seq57
Length=1790
Score = 733 bits (812), Expect = 0.0
Identities = 563/663 (85%), Gaps = 7/663 (1%)
Strand=Plus/Minus
Query 23 TGTGAAGCTCCTTCGACGAGTCGA-GTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAA 81
||| |||||||||||||||||||| || |||||||||||| |||||||||||||||||||
Sbjct 1316 TGTAAAGCTCCTTCGACGAGTCGAAGTAGTTTGGGAATGCTGCTCTAAATGGGAGGTAAA 1257
Query 82 TTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAG 141
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1256 TTTCTTCTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAG 1197
Query 142 ATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCT 201
||||||||||||||| |||||| ||||||||| |||||||||||||||||||||||||||
Sbjct 1196 ATGAAAAGCACTTTGAAAAGAGGGTTAAAAAGTACGTGAAATTGTTGAAAGGGAAGCGCT 1137
Query 202 TGCAACCAGACTTGCCCGCAGTTGCTCAACCGGC-CCCTCGGCCGGTGCACTCTTCTGCG 260
|| ||||||||||| | | | ||| || || ||| || ||||||||| | |
Sbjct 1136 TGTGACCAGACTTGCGCCGGGCGGATCATCCAGCGTTCTC-GCTGGTGCACTCCGCCCGG 1078
Query 261 GTCAGGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGG 320
||||||||||||| | | || | ||| |||||| |||||| ||||| || |||||
Sbjct 1077 TTCAGGCCAGCATCGGTTTTCGCCGGGGGACAAAGGCTTCGGGAACGTGGCTCCTTTCGG 1018
Query 321 GGGGTGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGCTCCGGCTA 380
|| ||||||||||||| | | ||| | || || |||| || | ||||||| |||| |
Sbjct 1017 GGAGTGTTATAGCCCGTTGCGTAATACCCCCGGCGGGGACCGACGACCGCGCTTCGGCAA 958
Query 381 GGATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACA 440
|||||||||||||||||| | |||| ||||||||| |||||||||| ||||||| | ||
Sbjct 957 GGATGCTGGCGTAATGGTCATCAGCGACCCGTCTTGAAACACGGACCGAGGAGTCAAGCA 898
Query 441 TCTATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAA 500
| ||||||||||||||||| ||||||| ||||||||||||||||||| ||||| ||
Sbjct 897 TTAGTGCGAGTGTTTGGGTGTAAAACCCGCACGCGTAATGAAAGTGAACGTAGGTGAGA- 839
Query 501 CCCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCAT 560
| || ||| ||||||||||||||||||| |||||| ||||||||||| ||||||
Sbjct 838 ---GCTTCGGCGCATCATCGACCGATCCTGATGTTTTCGGAAGGATTTGAGTAGGAGCAT 782
Query 561 AGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACT 620
| | ||||||||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct 781 TAACGCTTGGACCCGAAAGATGGTGAACTATACTTGAATAGGGTGAAGCCAGAGGAAACT 722
Query 621 CTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGG 680
||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||
Sbjct 721 CTGGTGGAGGCTCGCAGCGGTTCTGACGTGCAAATCGATCGTCAAATTTGAGTATAGGGG 662
Query 681 CGA 683
|||
Sbjct 661 CGA 659
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079815658700
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |