Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734675.1_202014-07-28]
8,535 sequences; 35,946,122 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq67 203 5e-50
seq29 143 4e-32
seq6443 93.3 7e-17
>seq67
Length=335
Score = 203 bits (224), Expect = 5e-50
Identities = 141/156 (90%), Gaps = 3/156 (2%)
Strand=Plus/Plus
Query 105 CCTCTAAGAAGCCAGCCACCAACCATAGTCGATG-GGGCTATTTAGCAGGTTAAGGTCTC 163
||||||||||||| || | ||| || ||| | |||||||||||||||||||||||||
Sbjct 1 CCTCTAAGAAGCCGGCGCGCCGCCAAAG-CGACGCGGGCTATTTAGCAGGTTAAGGTCTC 59
Query 164 GTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCAC 223
||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 60 GTTCGTTATCGCAATTAAGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCAC 119
Query 224 CACCCATAGAATCAA-GAAAGAGCTATCAATCTGTC 258
|||||||| |||||| ||||||||| ||||||||||
Sbjct 120 CACCCATAAAATCAAGGAAAGAGCTCTCAATCTGTC 155
>seq29
Length=2421
Score = 143 bits (158), Expect = 4e-32
Identities = 85/89 (96%), Gaps = 0/89 (0%)
Strand=Plus/Plus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2323 ACTCGCTGGCTGTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 2382
Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCT 90
|||||||||||||||||||||||| ||||
Sbjct 2383 CCTGTTATTGCCTCAAACTTCCATCGGCT 2411
>seq6443
Length=10054
Score = 93.3 bits (102), Expect = 7e-17
Identities = 76/91 (84%), Gaps = 6/91 (7%)
Strand=Plus/Minus
Query 150 CAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAA-----TCACT-CCACCAAC 203
||||| | ||||||||||||||||| ||||| |||||||| ||||| || | |||
Sbjct 461 CAGGTCAGGGTCTCGTTCGTTATCGCCATTAAGCAGACAAACGGGATCACTTCCGCAAAC 402
Query 204 TAAGAACGGCCATGCACCACCACCCATAGAA 234
||||||||||||||||||||| |||||| ||
Sbjct 401 TAAGAACGGCCATGCACCACCGCCCATAAAA 371
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796734118335
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |