Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734675.1_202014-07-28]
8,535 sequences; 35,946,122 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq18 473 4e-131
seq17 288 3e-75
>seq18
Length=640
Score = 473 bits (524), Expect = 4e-131
Identities = 288/305 (94%), Gaps = 0/305 (0%)
Strand=Plus/Minus
Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296
||||||| ||||||||||||| | ||| |||||||| ||| |||||||||||||||||
Sbjct 640 CTCCCACCTATTCTACACCTCCTATGTCTTTTCACAATGTCAAACTAGAGTCAAGCTCAA 581
Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 580 CAGGGTCTTCTTTCCCCGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 521
Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 520 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 461
Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 460 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 401
Query 477 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCA 536
| |||| ||| || ||||||||||||||||||||||||||||||||||||||||| |
Sbjct 400 TCAAATTACTTTGCTGTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACACCG 341
Query 537 CTTTC 541
|||||
Sbjct 340 CTTTC 336
>seq17
Length=961
Score = 288 bits (318), Expect = 3e-75
Identities = 219/253 (87%), Gaps = 8/253 (3%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
|||||| ||||| |||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 710 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGCCCCCCTTAGGACACCTGCGTTATG 769
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAAT-GTCATCAACCCGGAT 125
|||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||| |
Sbjct 770 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGGTCTTCAACCCGGGT 829
Query 126 CGGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTG 185
| ||||||| ||||| |||| |||||| ||| || || |||| |||||| || |
Sbjct 830 CCGCCCGCG-AGGACGTTAAAACCAGAAGTTGGACG--TAAATCCAGCCCCGCTTAATCG 886
Query 186 ATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCA-CT 244
| ||||||||||||| ||| | ||||||||||||||| |||||||| ||||||| |
Sbjct 887 AATAAGTAAAAAAACAATAGGAGTAGTGGTATTTCACCGGCGCCGAA---GCTCCCACCC 943
Query 245 TATTCTACACCTC 257
|||||||||||||
Sbjct 944 TATTCTACACCTC 956
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1635060435680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |