Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734675.1_202014-07-28]
8,535 sequences; 35,946,122 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq1727 517 3e-144
seq66 226 9e-57
>seq1727
Length=573
Score = 517 bits (572), Expect = 3e-144
Identities = 324/348 (93%), Gaps = 1/348 (0%)
Strand=Plus/Plus
Query 157 CCGTTACCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGA 216
||||||||||||| |||| || ||||| | || || ||||||||||||||||||||
Sbjct 5 CCGTTACCCGTTGTCACCACGGCTGGCCAAGACCCAGCCGTCGAAAGTTGATAGGGCAGA 64
Query 217 AATTTGAATGAACCATCGCCGGCTCAAGGCCATGCGATTCGTTAAGTTATTATGAATCAC 276
||||||||||||||||||||||| ||||||| ||||||||| ||||||| |||||||||
Sbjct 65 AATTTGAATGAACCATCGCCGGCGCAAGGCCGTGCGATTCGAGAAGTTATCATGAATCAC 124
Query 277 CAAGGAGCCCCGAAGGGCGTTGGTTTTTTATCTAATAAATACACCCCTTCCGAAGTCGGG 336
|| |||||||||||||| ||||||||| |||||||||||||||||||||||||||||||
Sbjct 125 CAGTGAGCCCCGAAGGGCATTGGTTTTTAATCTAATAAATACACCCCTTCCGAAGTCGGG 184
Query 337 GTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCA 396
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 185 GTTTTTAGCATGTAATAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCA 244
Query 397 AATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACT 456
||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||
Sbjct 245 AATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCGCTGTATA-ATTGCTTATACT 303
Query 457 TAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504
||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 304 TAGACATGCATGGCTTAATCTTTAAGACAAGCATATGACTACTGGCAG 351
>seq66
Length=713
Score = 226 bits (250), Expect = 9e-57
Identities = 157/178 (88%), Gaps = 0/178 (0%)
Strand=Plus/Minus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||
Sbjct 179 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTCTCGTCACTACCT 120
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
| ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 119 CGCCGTGTCGGCATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTAAACGCCGTT 60
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGG 178
|||||||| ||||||| |||| |||||| | ||||||||||||| |||| ||
Sbjct 59 TCTCAGGCGTTTTCTCCGGGGTCGAGCCCTAACCCTCCGTTACCCGTTGTCACCACGG 2
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1510271087360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |