Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734705.1_202014-07-28]
9,429 sequences; 36,235,577 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq84 363 3e-98
seq226 102 2e-19
seq3977 84.2 4e-14
>seq84
Length=2421
Score = 363 bits (402), Expect = 3e-98
Identities = 227/243 (93%), Gaps = 2/243 (1%)
Strand=Plus/Minus
Query 86 TATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTT 145
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2421 TATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTT 2362
Query 146 CTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGT 205
||||||||||||||||||||||||||| ||||| ||||| | || |||||||| |||
Sbjct 2361 CTGGGCCGCACGCGCGCTACACTGACACAGCCAGCGAGTCCTTC--CTTGGCCGAGAGGC 2304
Query 206 CTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTC 265
| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 2303 CCGGGTAATCTTGTTAAACTGTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTC 2244
Query 266 AACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTT 325
|||||||||| |||||||||||| ||||||||| ||||||||||||||||||||||||
Sbjct 2243 AACGAGGAATCCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGTCCCTGCCCTTT 2184
Query 326 GTA 328
|||
Sbjct 2183 GTA 2181
>seq226
Length=345
Score = 102 bits (112), Expect = 2e-19
Identities = 67/74 (91%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79
|| ||||||||||||||||||||||||| | ||||||||||| ||||||||||||||
Sbjct 272 GAACGAGACCTTAACCTGCTAAATAGCCCGCGTCGCTTTGGCGGCGCGCCGGCTTCTTAG 331
Query 80 AGGGACTATCGGCT 93
||||||||||||||
Sbjct 332 AGGGACTATCGGCT 345
>seq3977
Length=9490
Score = 84.2 bits (92), Expect = 4e-14
Identities = 64/75 (85%), Gaps = 2/75 (3%)
Strand=Plus/Minus
Query 164 ACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAA 223
||||||||| ||||| ||||| | || |||||||| ||| | ||||||||||||||||
Sbjct 2633 ACACTGACACAGCCAGCGAGTCCTTC--CTTGGCCGAGAGGCCCGGGTAATCTTGTTAAA 2576
Query 224 CTCTGTCGTGCTGGG 238
|| ||||||||||||
Sbjct 2575 CTGTGTCGTGCTGGG 2561
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947110688512
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |