Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734705.1_202014-07-28] 9,429 sequences; 36,235,577 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq84 363 3e-98 seq226 102 2e-19 seq3977 84.2 4e-14 >seq84 Length=2421 Score = 363 bits (402), Expect = 3e-98 Identities = 227/243 (93%), Gaps = 2/243 (1%) Strand=Plus/Minus Query 86 TATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTT 145 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2421 TATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTT 2362 Query 146 CTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGT 205 ||||||||||||||||||||||||||| ||||| ||||| | || |||||||| ||| Sbjct 2361 CTGGGCCGCACGCGCGCTACACTGACACAGCCAGCGAGTCCTTC--CTTGGCCGAGAGGC 2304 Query 206 CTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTC 265 | |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct 2303 CCGGGTAATCTTGTTAAACTGTGTCGTGCTGGGGATAGAGCATTGCAATTATTGCTCTTC 2244 Query 266 AACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGCCCTTT 325 |||||||||| |||||||||||| ||||||||| |||||||||||||||||||||||| Sbjct 2243 AACGAGGAATCCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGTCCCTGCCCTTT 2184 Query 326 GTA 328 ||| Sbjct 2183 GTA 2181 >seq226 Length=345 Score = 102 bits (112), Expect = 2e-19 Identities = 67/74 (91%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || ||||||||||||||||||||||||| | ||||||||||| |||||||||||||| Sbjct 272 GAACGAGACCTTAACCTGCTAAATAGCCCGCGTCGCTTTGGCGGCGCGCCGGCTTCTTAG 331 Query 80 AGGGACTATCGGCT 93 |||||||||||||| Sbjct 332 AGGGACTATCGGCT 345 >seq3977 Length=9490 Score = 84.2 bits (92), Expect = 4e-14 Identities = 64/75 (85%), Gaps = 2/75 (3%) Strand=Plus/Minus Query 164 ACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAA 223 ||||||||| ||||| ||||| | || |||||||| ||| | |||||||||||||||| Sbjct 2633 ACACTGACACAGCCAGCGAGTCCTTC--CTTGGCCGAGAGGCCCGGGTAATCTTGTTAAA 2576 Query 224 CTCTGTCGTGCTGGG 238 || |||||||||||| Sbjct 2575 CTGTGTCGTGCTGGG 2561 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947110688512