Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734735.1_202014-07-28]
9,152 sequences; 36,003,007 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq48 215 8e-54
>seq48
Length=2502
Score = 215 bits (238), Expect = 8e-54
Identities = 223/280 (80%), Gaps = 9/280 (3%)
Strand=Plus/Plus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||||| | |||||| |||||||||||||||| |||| ||| ||||||
Sbjct 1193 GTACGAGAGGAACCGCTCA-TTCAGA-TAATTGGTTTTTGCGGTTGTCCGACAGGGCAGT 1250
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCAT-GCC 119
|||||||||||||||||||| |||| | ||||||||||||||||||| |||||| | |||
Sbjct 1251 GCCGCGAAGCTACCATCTGCAGGATAACGGCTGAACGCCTCTAAGTCGGAATCCTTGGCC 1310
Query 120 AGAACGGGGTGATTCTCTCCTGCACATCGTAGTCGGATACGAATAGGCTTCGGCCCCGAA 179
|||||| | ||| | |||| |||| | ||| |||||| ||||||||||||||| || |
Sbjct 1311 AGAACGCGACGATAC-CTCCCGCACGT-TTAGACGGATAAGAATAGGCTTCGGCCTCGTA 1368
Query 180 CCTTAGCAGGCCGGCAACGGGCGTCCCGC-GGAAGCGCGGGGCGCTCAGCTGGCGGATTG 238
|| |||||| || ||| || | || ||||||| || | | | | ||| ||||
Sbjct 1369 TCTCAGCAGG-CGATAAC-CCCGCCGGGCTCGAAGCGCCCGGTGGTGA-TTCGCGTATTG 1425
Query 239 CAATTTCACCATGCGCAGGGATAAATCCTTTGCAGACGAC 278
||||| || |||| ||| ||||||||||||||||||
Sbjct 1426 TAATTTTGACACGCGCGGGGTCAAATCCTTTGCAGACGAC 1465
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 819127369728
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |