Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734755.1_202014-07-28]
9,277 sequences; 36,003,397 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq6 428 2e-117
seq53 320 7e-85
>seq6
Length=1058
Score = 428 bits (474), Expect = 2e-117
Identities = 335/397 (84%), Gaps = 6/397 (2%)
Strand=Plus/Minus
Query 288 GGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGTTATAGCCCGGGGTGGAATGC 347
||| |||||| |||||| ||||| || ||||||| ||||||||||||| | | ||| |
Sbjct 1052 GGACAAAGGCTTCGGGAACGTGGCTCCTTTCGGGGAGTGTTATAGCCCGTTGCGTAATAC 993
Query 348 GGCCCGCCTGGACTGAGGTCCGCGCTCCGGCTAGGATGCTGGCGTAATGGTTGTAAGCGG 407
|| || |||| || | ||||||| |||| ||||||||||||||||||| | ||||
Sbjct 992 C-CCGGCGGGGACCGACGACCGCGCTTCGGCAAGGATGCTGGCGTAATGGTCATCAGCGA 934
Query 408 CCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACC 467
||||||||| |||||||||| ||||||| | ||| ||||||||||||||||| |||||
Sbjct 933 CCCGTCTTGAAACACGGACCGAGGAGTCAAGCATTAGTGCGAGTGTTTGGGTGTAAAACC 874
Query 468 CGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGATC 527
|| ||||||||||||||||||| ||||| || | || ||| ||||||||||||
Sbjct 873 CGCACGCGTAATGAAAGTGAACGTAGGTGAGAGCTTC----GGCGCATCATCGACCGATC 818
Query 528 CTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAA 587
||||||| |||||| ||||||||||| |||||| | | |||||||||||||||||||
Sbjct 817 CTGATGTTTTCGGAAGGATTTGAGTAGGAGCATTAACGCTTGGACCCGAAAGATGGTGAA 758
Query 588 CTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGC 647
|||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct 757 CTATACTTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGAC 698
Query 648 -GTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
||||||||||||||||||||||| ||||||||||||
Sbjct 697 GGTGCAAATCGATCGTCAAATTTGAGTATAGGGGCGA 661
>seq53
Length=774
Score = 320 bits (354), Expect = 7e-85
Identities = 248/291 (85%), Gaps = 3/291 (1%)
Strand=Plus/Plus
Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82
||| |||||||||||||||||||||| |||||||||||| ||||||||||||||||||||
Sbjct 483 TGTAAAGCTCCTTCGACGAGTCGAGTAGTTTGGGAATGCTGCTCTAAATGGGAGGTAAAT 542
Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 543 TTCTTCTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 602
Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202
|||||||||||||| |||||| ||||||||| ||||||||||||||||||||||||||||
Sbjct 603 TGAAAAGCACTTTGAAAAGAGGGTTAAAAAGTACGTGAAATTGTTGAAAGGGAAGCGCTT 662
Query 203 GCAACCAGACTTGCCCGCAGTTGCTCAACCGGC-CCCTCGGCCGGTGCACTCTTCTGCGG 261
| ||||||||||| | | | ||| || || ||| || ||||||||| | |
Sbjct 663 GTGACCAGACTTGCGCCGGGCGGATCATCCAGCGTTCTC-GCTGGTGCACTCCGCCCGGT 721
Query 262 TCAGGCCAGCATC-AGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGC 311
||||||||||||| | | || | ||| |||||| |||||| |||||
Sbjct 722 TCAGGCCAGCATCGGGTTTTCGCCGGGGGACAAAGGCTTCGGGAACGTGGC 772
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079801008350
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |