Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734755.1_202014-07-28] 9,277 sequences; 36,003,397 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq6 428 2e-117 seq53 320 7e-85 >seq6 Length=1058 Score = 428 bits (474), Expect = 2e-117 Identities = 335/397 (84%), Gaps = 6/397 (2%) Strand=Plus/Minus Query 288 GGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGGTGTTATAGCCCGGGGTGGAATGC 347 ||| |||||| |||||| ||||| || ||||||| ||||||||||||| | | ||| | Sbjct 1052 GGACAAAGGCTTCGGGAACGTGGCTCCTTTCGGGGAGTGTTATAGCCCGTTGCGTAATAC 993 Query 348 GGCCCGCCTGGACTGAGGTCCGCGCTCCGGCTAGGATGCTGGCGTAATGGTTGTAAGCGG 407 || || |||| || | ||||||| |||| ||||||||||||||||||| | |||| Sbjct 992 C-CCGGCGGGGACCGACGACCGCGCTTCGGCAAGGATGCTGGCGTAATGGTCATCAGCGA 934 Query 408 CCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACC 467 ||||||||| |||||||||| ||||||| | ||| ||||||||||||||||| ||||| Sbjct 933 CCCGTCTTGAAACACGGACCGAGGAGTCAAGCATTAGTGCGAGTGTTTGGGTGTAAAACC 874 Query 468 CGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGTGAGGGTGCACCATCGACCGATC 527 || ||||||||||||||||||| ||||| || | || ||| |||||||||||| Sbjct 873 CGCACGCGTAATGAAAGTGAACGTAGGTGAGAGCTTC----GGCGCATCATCGACCGATC 818 Query 528 CTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAA 587 ||||||| |||||| ||||||||||| |||||| | | ||||||||||||||||||| Sbjct 817 CTGATGTTTTCGGAAGGATTTGAGTAGGAGCATTAACGCTTGGACCCGAAAGATGGTGAA 758 Query 588 CTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGC 647 |||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 757 CTATACTTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGAC 698 Query 648 -GTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 ||||||||||||||||||||||| |||||||||||| Sbjct 697 GGTGCAAATCGATCGTCAAATTTGAGTATAGGGGCGA 661 >seq53 Length=774 Score = 320 bits (354), Expect = 7e-85 Identities = 248/291 (85%), Gaps = 3/291 (1%) Strand=Plus/Plus Query 23 TGTGAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAAT 82 ||| |||||||||||||||||||||| |||||||||||| |||||||||||||||||||| Sbjct 483 TGTAAAGCTCCTTCGACGAGTCGAGTAGTTTGGGAATGCTGCTCTAAATGGGAGGTAAAT 542 Query 83 TTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 142 |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct 543 TTCTTCTAAAGCTAAATACCGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGA 602 Query 143 TGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTT 202 |||||||||||||| |||||| ||||||||| |||||||||||||||||||||||||||| Sbjct 603 TGAAAAGCACTTTGAAAAGAGGGTTAAAAAGTACGTGAAATTGTTGAAAGGGAAGCGCTT 662 Query 203 GCAACCAGACTTGCCCGCAGTTGCTCAACCGGC-CCCTCGGCCGGTGCACTCTTCTGCGG 261 | ||||||||||| | | | ||| || || ||| || ||||||||| | | Sbjct 663 GTGACCAGACTTGCGCCGGGCGGATCATCCAGCGTTCTC-GCTGGTGCACTCCGCCCGGT 721 Query 262 TCAGGCCAGCATC-AGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGC 311 ||||||||||||| | | || | ||| |||||| |||||| ||||| Sbjct 722 TCAGGCCAGCATCGGGTTTTCGCCGGGGGACAAAGGCTTCGGGAACGTGGC 772 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079801008350