Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734755.1_202014-07-28]
9,277 sequences; 36,003,397 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq1391 549 6e-154
seq86 226 9e-57
>seq1391
Length=741
Score = 549 bits (608), Expect = 6e-154
Identities = 368/409 (90%), Gaps = 5/409 (1%)
Strand=Plus/Plus
Query 133 CGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGATTAAGT 192
|||||||| |||| |||||| ||| || || |||| |||||| || || |||||
Sbjct 1 CGAAGGACGTTAAAACCAGAAGTTGGACGT--AAATCCAGCCCCGCTTAATCGAATAAGT 58
Query 193 aaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTATTCTAC 252
|||||||| ||| | ||||||||||||||| |||||||| |||||||| ||||||||
Sbjct 59 AAAAAAACAATAGGAGTAGTGGTATTTCACCGGCGCCGAA---GCTCCCACCTATTCTAC 115
Query 253 ACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCC 312
||||| | ||| |||||||| ||| |||||||||||||||||||||||||||||||||
Sbjct 116 ACCTCCTATGTCTTTTCACAATGTCAAACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCC 175
Query 313 CGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACA 372
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 176 CGCTGATTCTGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACA 235
Query 373 GTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTA 432
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 236 GTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTA 295
Query 433 CCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTT 492
||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||
Sbjct 296 CCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTCAAATTACTTTGCTG 355
Query 493 TGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCACTTTC 541
||||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct 356 TGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACACCGCTTTC 404
>seq86
Length=1126
Score = 226 bits (250), Expect = 9e-57
Identities = 143/155 (92%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
|||||| ||||| |||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 969 CTTTTGTTCTACTGGAGATTTCTGTTCTCCATGAGCCCCCCTTAGGACACCTGCGTTATG 1028
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||
Sbjct 1029 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCAACCCGGGTC 1088
Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCG 161
||||||||||||| |||| |||||| ||| ||
Sbjct 1089 CGCCCGCGAAGGACGTTAAAACCAGAAGTTGGACG 1123
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1635048302496
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |