Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734755.1_202014-07-28]
9,277 sequences; 36,003,397 total letters
Query= AAMG01002244.1
Length=504
Score E
Sequences producing significant alignments: (Bits) Value
seq98 500 3e-139
seq87 210 7e-52
>seq98
Length=553
Score = 500 bits (554), Expect = 3e-139
Identities = 306/324 (94%), Gaps = 1/324 (0%)
Strand=Plus/Minus
Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240
||||| | || || |||||||||||||||||||||||||||||||||||||||||||
Sbjct 548 GGCCAAGACCCAGCCGTCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCG 489
Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300
||||||| ||||||||| ||||||| ||||||||||| |||||||||||||| |||||
Sbjct 488 CAAGGCCGTGCGATTCGAGAAGTTATCATGAATCACCAGTGAGCCCCGAAGGGCATTGGT 429
Query 301 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 360
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 428 TTTTAATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 369
Query 361 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 368 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 309
Query 421 GCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 480
||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||
Sbjct 308 GCCATTCGCAGTTTCGCTGTATA-ATTGCTTATACTTAGACATGCATGGCTTAATCTTTA 250
Query 481 AGACAAGCATATGACTACTGGCAG 504
||||||||||||||||||||||||
Sbjct 249 AGACAAGCATATGACTACTGGCAG 226
>seq87
Length=697
Score = 210 bits (232), Expect = 7e-52
Identities = 143/161 (89%), Gaps = 0/161 (0%)
Strand=Plus/Minus
Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60
||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||
Sbjct 161 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTCTCGTCACTACCT 102
Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120
| ||||||||| |||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 101 CGCCGTGTCGGCATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTAAACGCCGTT 42
Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTT 161
|||||||| ||||||| |||| |||||| | |||||
Sbjct 41 TCTCAGGCGTTTTCTCCGGGGTCGAGCCCTAACCCTCCGTT 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1510259880192
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |