Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734785.1_202014-07-28]
8,427 sequences; 35,801,870 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq11 214 3e-53
seq10 154 2e-35
seq7156 93.3 7e-17
>seq11
Length=336
Score = 214 bits (236), Expect = 3e-53
Identities = 143/157 (91%), Gaps = 2/157 (1%)
Strand=Plus/Minus
Query 103 TCCCTCTAAGAAGCCAGCCACCAACCATAGTCGATG-GGGCTATTTAGCAGGTTAAGGTC 161
||||||||||||||| || | ||| || ||| | |||||||||||||||||||||||
Sbjct 336 TCCCTCTAAGAAGCCGGCGCGCCGCCAAAG-CGACGCGGGCTATTTAGCAGGTTAAGGTC 278
Query 162 TCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACC 221
||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 277 TCGTTCGTTATCGCAATTAAGCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACC 218
Query 222 ACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258
|||||||||| ||||||||||||||| ||||||||||
Sbjct 217 ACCACCCATAAAATCAAGAAAGAGCTCTCAATCTGTC 181
>seq10
Length=2312
Score = 154 bits (170), Expect = 2e-35
Identities = 98/105 (93%), Gaps = 1/105 (1%)
Strand=Plus/Plus
Query 2 ACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 61
||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2209 ACTCGCTGGCTGTGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGA 2268
Query 62 CCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCC 106
|||||||||||||||||||||||| |||| | |||| ||||||||
Sbjct 2269 CCTGTTATTGCCTCAAACTTCCATCGGCTTG-AGCCGATAGTCCC 2312
>seq7156
Length=9977
Score = 93.3 bits (102), Expect = 7e-17
Identities = 76/91 (84%), Gaps = 6/91 (7%)
Strand=Plus/Minus
Query 150 CAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAA-----TCACT-CCACCAAC 203
||||| | ||||||||||||||||| ||||| |||||||| ||||| || | |||
Sbjct 381 CAGGTCAGGGTCTCGTTCGTTATCGCCATTAAGCAGACAAACGGGATCACTTCCGCAAAC 322
Query 204 TAAGAACGGCCATGCACCACCACCCATAGAA 234
||||||||||||||||||||| |||||| ||
Sbjct 321 TAAGAACGGCCATGCACCACCGCCCATAAAA 291
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796734951987
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |