Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Magnaporthe_20oryzae_20[genbank_20GCA_5F000734785.1_202014-07-28]
8,427 sequences; 35,801,870 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq10 372 6e-101
seq11 86.0 1e-14
seq4493 84.2 4e-14
>seq10
Length=2312
Score = 372 bits (412), Expect = 6e-101
Identities = 232/248 (94%), Gaps = 2/248 (1%)
Strand=Plus/Minus
Query 81 GGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAG 140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2312 GGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAG 2253
Query 141 ATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCCGG 200
|||||||||||||||||||||||||||||||| ||||| ||||| | || ||||||||
Sbjct 2252 ATGTTCTGGGCCGCACGCGCGCTACACTGACACAGCCAGCGAGTCCTTC--CTTGGCCGA 2195
Query 201 AAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATTGC 260
||| | |||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 2194 GAGGCCCGGGTAATCTTGTTAAACTGTGTCGTGCTGGGGATAGAGCATTGCAATTATTGC 2135
Query 261 TCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCTGC 320
||||||||||||||| |||||||||||| ||||||||| |||||||||||||||||||
Sbjct 2134 TCTTCAACGAGGAATCCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGTCCCTGC 2075
Query 321 CCTTTGTA 328
||||||||
Sbjct 2074 CCTTTGTA 2067
>seq11
Length=336
Score = 86.0 bits (94), Expect = 1e-14
Identities = 58/65 (89%), Gaps = 0/65 (0%)
Strand=Plus/Plus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79
|| ||||||||||||||||||||||||| | ||||||||||| ||||||||||||||
Sbjct 272 GAACGAGACCTTAACCTGCTAAATAGCCCGCGTCGCTTTGGCGGCGCGCCGGCTTCTTAG 331
Query 80 AGGGA 84
|||||
Sbjct 332 AGGGA 336
>seq4493
Length=28520
Score = 84.2 bits (92), Expect = 4e-14
Identities = 64/75 (85%), Gaps = 2/75 (3%)
Strand=Plus/Plus
Query 165 CACTGACAGAGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAAC 224
|||||||| ||||| ||||| | || |||||||| ||| | |||||||||||||||||
Sbjct 6828 CACTGACACAGCCAGCGAGTCCTTC--CTTGGCCGAGAGGCCCGGGTAATCTTGTTAAAC 6885
Query 225 TCTGTCGTGCTGGGG 239
| |||||||||||||
Sbjct 6886 TGTGTCGTGCTGGGG 6900
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947120179456
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |